We had previously isolated a facultatively anaerobic hyperthermophilic archaeon, Pyrobaculum calidifontis strain VA1. Here, we found that strain VA1, when grown under aerobic conditions, harbors high catalase activity. The catalase was purified 91-fold from crude extracts and displayed a specific activity of 23,500 U/mg at 70°C. The enzyme exhibited a K m value of 170 mM toward H 2 O 2 and a k cat value of 2.9 ؋ 10 4 s ؊1 ·subunit
؊1at 25°C. Gel filtration chromatography indicated that the enzyme was a homotetramer with a subunit molecular mass of 33,450 Da. The purified catalase did not display the Soret band, which is an absorption band particular to heme enzymes. In contrast to typical heme catalases, the catalase was not strongly inhibited by sodium azide. Furthermore, with plasma emission spectroscopy, we found that the catalase did not contain iron but instead contained manganese. Our biochemical results indicated that the purified catalase was not a heme catalase but a manganese (nonheme) catalase, the first example in archaea. Intracellular catalase activity decreased when cells were grown anaerobically, while under aerobic conditions, an increase in activity was observed with the removal of thiosulfate from the medium, or addition of manganese. Based on the N-terminal amino acid sequence of the purified protein, we cloned and sequenced the catalase gene (kat Pc ). The deduced amino acid sequence showed similarity with that of the manganese catalase from a thermophilic bacterium, Thermus sp. YS 8-13. Interestingly, in the complete archaeal genome sequences, no open reading frame has been assigned as a manganese catalase gene. Moreover, a homology search with the sequence of kat Pc revealed that no orthologue genes were present on the archaeal genomes, including those from the "aerobic" (hyper)-thermophilic archaea Aeropyrum pernix, Sulfolobus solfataricus, and Sulfolobus tokodaii. Therefore, Kat Pc can be considered a rare example of a manganese catalase from archaea.In aerobic organisms, hydrogen peroxide is produced by various enzymatic reactions, particularly the univalent reduction of molecular oxygen by oxidases and the disproportionation of superoxide by superoxide dismutases. Hydrogen peroxide is a toxic molecule as it can both oxidize and reduce organic substrates in cells. Catalases (EC 1.11.1.6) remove this toxicity by catalyzing the disproportionation of hydrogen peroxide into molecular oxygen and water. Along with superoxide dismutases, catalases play an important role in defending the cell against oxidative stress, and are distributed in almost all aerobic and facultatively anaerobic organisms.Catalases are assigned to three phylogenetically distinct groups: two groups comprised of heme catalases and one group of nonheme catalases (29). The monofunctional (or typical) catalases, which are one type of heme catalases, have been found in many bacteria, archaea, plants, fungi, and animals. They display a broad range of subunit sizes (55 to 84 kDa) and are generally tetrameric enzymes. Monofuncti...