7 8 Running Head: Quorum sensing contributes to bet hedging in Bacillus 9 #Address correspondence to Ines Mandic-Mulec, ines.mandicmulec@bf.uni-lj.si. 10 42Biofilms are multicellular groups encased in extracellular matrix that are believed to be the 43 default mode of microbial growth in nature (1-3). Biofilm formation is often regulated by 44 quorum sensing (QS) (4), a wide spread microbial communication system that coordinates 45 bacterial gene expression in accordance with cell density (5). Bacillus subtilis is the most 46 studied species in the genus Bacillus (6, 7), which has served over the years as an excellent 47 model to investigate development of metabolically dormant and heat resistant spores (8), a 48 model for biofilm development (9-12), division of labor (13-16) and for a variety of intra 49 and interspecies social interactions (17). This Gram-positive spore former relies on peptide 50 based QS system, encoded by the comQXPA gene cluster (18, 19), which is wide spread 51 among Firmicutes (20). It controls transcriptional activity of several adaptive processes 52 including synthesis of a lipopetide antibiotic surfactin (21-23), exoprotease production (24, 53 25), and competence development (26). The extracellular signaling peptide ComX is 54 synthesized as a pre-peptide, cleaved and post-translationally modified by the isoprenoid 55 transferase ComQ (21, 27). Therefore, the gene comQ is essential for a functional and active 56 QS system. Mature and biologically active ComX accumulates extracellularly, where it 57interacts with the sensory histidine kinase ComP, which then phosphorylates ComA (28).
58ComA-P in its active phosphorylated form regulates transcription of several target genes (29-59 31). ComA-P also increases the transcription rates of the pleiotropic regulatory gene degQ 60 (25, 30, 32), which ultimately increases the DegU phosphorylation rate (25). DegU-P is 61 required for the activation of extracellular degradative enzyme production. This regulatory 62 network is relevant also during biofilm development (33), where operational ComX 63 dependent QS is required for exoprotease production (24).
64In biofilms, cells are encased in a structure formed out of extracellular polysaccharides (Eps), 65 proteins, and extracellular DNA (3); but the ratios of each biofilm constituent differ 66 depending on the specific strain, media and growth conditions (34). In B. subtilis the epsA-O 67 operon is involved in the production of the major polysaccharide component of the biofilm 68 matrix (35), which is essential for development of floating biofilm (pellicle) (36). TasA, the 69 major matrix protein, encoded by the tapA-tasA-sipW operon (hereafter referred to as the 70 tapA operon), gives structural support to floating biofilm. Although TasA and TapA proteins 71 are not essential for the formation of floating biofilms, the tasA mutant forms a less 72 prominent structures (37, 38). The molecular regulation of the operons involved in the 73 synthesis of the biofilm matrix components is very complex (39)....