Quality assurance (QA) before patient treatment plays a major role in complex radiotherapy (RT) treatment planning. Phantoms are the standard materials that are used for the pre-treatment QA of patients. Contemporary phantoms used in RT are mainly water-based, having simple geometry and of uniform density. These phantoms dose not replicate the exact heterogeneities of the actual human body. The present work aims to evaluate the results of relative dosimetry performed on in-house developed heterogeneous thorax phantom (HTP) using an electronic portal imaging device (EPID). To perform the relative dosimetry, contours were drawn on HTP at three different locations and intensity modulated radiotherapy (IMRT), as well as Rapid ARC (RA), were generated on it to compare the fluence obtained on TPS as well as on linac machine. The gamma evaluation results indicate a strong correlation between planned and the measured fluence. We found the EPID-based QA done on HTP explore its property as a QA tool and it can further be used to perform patient-specific relative dosimetry.