2001
DOI: 10.1021/jp010985m
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Random Sequential Adsorption Model for the Differential Coverage of Gold (111) Surfaces by Two Related Silicon Phthalocyanines

Abstract: We present a simple model for the discrepancy in the coverage of a gold (111) surface by two silicon phthalocyanines. The model involves random sequential adsorption (RSA) simulations with two different landing molecules, one of which is tilted relative to the substrate surface and can (under certain conditions) allow neighboring molecules to overlap. This results in a jamming limit that is near full coverage of the surface. The nonoverlapping molecules reproduce the half-monolayer jamming limit that is common… Show more

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Cited by 8 publications
(4 citation statements)
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“…The signal intensity from sulfur atoms at the gold interface was corrected based on 26 where I d is the photoelectron intensity from the layer of interest covered by an overlying film, d is the thickness of the film, I o is the intensity that would be observed with no overlying film, and λ is the escape depth of electrons of a given energy through the overlying film. According to Penn and co-workers, the escape depth of 1100 eV electrons (corresponding roughly to sulfur 2p electrons with 160 eV of binding energy) through a variety of organic compounds is ∼30 Å . So, for the bound sulfurs that are buried about 22 Å deep inside the film, the observed intensity will experience a 50% drop based on eq 1.…”
Section: Resultsmentioning
confidence: 99%
“…The signal intensity from sulfur atoms at the gold interface was corrected based on 26 where I d is the photoelectron intensity from the layer of interest covered by an overlying film, d is the thickness of the film, I o is the intensity that would be observed with no overlying film, and λ is the escape depth of electrons of a given energy through the overlying film. According to Penn and co-workers, the escape depth of 1100 eV electrons (corresponding roughly to sulfur 2p electrons with 160 eV of binding energy) through a variety of organic compounds is ∼30 Å . So, for the bound sulfurs that are buried about 22 Å deep inside the film, the observed intensity will experience a 50% drop based on eq 1.…”
Section: Resultsmentioning
confidence: 99%
“…Therefore, the number of GM1 molecules (at 4 mol %) per unit area is approximately half the number of binding sites required for binding a full monolayer of the cholera toxin. In reality, given the nanomolar affinity of the cholera toxin for ganglioside-presenting surfaces, , binding of the toxin is essentially irreversible. ,, Therefore, assuming a random sequential adsorption model in which approximately 55% coverage is maximally possible, , the number of cholera toxin molecules that can bind to a surface presenting GM1 molecules is ∼6.3 × 10 4 molecules per μm 2 . Therefore, a DLPC surface doped with ∼4 mol % GM1 is probably sufficient for supporting the maximum possible amount of binding of the cholera toxin.…”
Section: Resultsmentioning
confidence: 99%
“…The estimation of K i from the measured IC50 value is given by where K i is the equilibrium dissociation constant for the inhibitor, L is the concentration of FITC−CTx, and K L is the equilibrium dissociation constant of FITC−CTx. There are significant discrepancies in the literature in the reported values of the binding constant between the cholera toxin and the GM1 ganglioside; a reasonable “consensus” value is ∼2 nM . Since we were unable to directly estimate the value of K L , we use K L = 2 nM and assume that labeling of the toxin does not influence its binding affinity.…”
Section: Referencesmentioning
confidence: 99%
“…Thus, it is necessary to determine if the error will lie within acceptable limits when such masses are bound. We assume random sequential absorption coverage of the binding regions, 55,56 and calculate the number of antibodies bound if we model the antibody as a sphere, and assume a "footprint" of ͑6.2 nm͒ 2 . The effect of the increased hydrodynamic radius is counteracted by the reduced number of molecules capable of binding to the membrane surface, so this case is covered by the work shown in Fig.…”
Section: E Methods Agreementmentioning
confidence: 99%