An inhibitor of polypeptide-chain initiation was isolated from E. coli cells. This protein inhibits formation of the 30S or 70S initiation complex with either fMet-tRNAf as initiator and AUG, MS2 RNA, or late T4 RNA as messenger, or acPhe-tRNA as initiator and poly-(U) as messenger. Chain elongation, e.g., poly(U) translation at high Mg2+ concentration, is not inhibited. The inhibitor is rendered ineffective when active aminoacylation of tRNA is taking place, e.g., during natural mRNA translation. This inhibitor is distinct from the so-called interference (i) factors, which interfere exclusively with the action of initiation factor 3. Since the new inhibitor can apparently be turned on and off, it may have a regulatory function in translation.Revel and collaborators (1) isolated from 1.0 M NH4Cl washes of Escherichia coli ribosomes a protein factor that inhibits the initiation factor (IF)-3-dependent translationof MS2 RNAbut not that of late T4 RNA. They refer to this protein as the i (interference) factor. This factor was identified (2, 3) as the a subunit of Q0 replicase, one of the three subunits contributed by the host cell (4, 5). We have described (6, 7) the isolation of two messenger-discriminating species of E. coli IF-3, referred to as 1F-3a and IF-33. IF-3a has selectivity for such messengers as MS2, E. coli, and early T4 RNA, whereas IF-3,3 selects predominantly for late T4 RNA. While Revel's i factor (ia) is specific for IF-3a, we found one other factor (id) specific for IF-3,3 in the high-salt ribosomal wash (8).We now report on the isolation of a new inhibitor which, unlike the i factors, inhibits formation of the initiation complex in systems, e.g., AUG-dependent ribosomal binding of fMet-tRNAf, poly(U)-dependent ribosomal binding of acPhe-tRNA, that do not require IF-3. The inhibitor is rendered inactive under optimal conditions for natural mRNA (e.g., MS2 RNA) translation, when tRNA is being actively aminoacylated. The fact that the inhibitor may be either active or inactive suggests that it may play a role in regulation of translation.
MATERIALS AND METHODSThe Inhibitor was first discovered in high-salt ribosomal washes. Later it was found also in the high-speed supernatant. An outline of its purification from the 1.0 M NH4C1 wash of E. coli MRE600 ribosomes is given here. Cells grown as described (6) were harvested at mid-logarithmic phase and frozen until used. Preparation and washing of the ribosomes Abbreviations: acPhe-tRNA, N-acetylphenylalanyl-transfer RNA; Mg(OAc)2, magnesium acetate; IF, initiation factor; i factor, interference factor; EF, elongation factor. * To whom reprint requests should be sent.was as described (7)