The paper completed the software and hardware design of GNSS intermediate frequency signal acquisition system under Linux operating system, realized the GNSS software receiver under Linux. Basing on QT C++ graphical user interface application development framework and Qwt plug-in, the software and data graphical display interface was also accomplished. By caching the data of RF module and controlling read and write signals of CY7C68013A through FPGA, the high-speed data transmission function was completed. The test results show that the data transmission rate of this data acquisition system can reach more than 200 Mbps, software receiver satisfies the requirement of positioning accuracy, has good flexibility and higher adaptability, and the algorithm of which was easy to be expanded and upgraded.