Rice root morphological and physiological traits interaction with rhizosphere soil and its effect on methane emissions in paddy fields

Chen, Yun; Li, Siyu; Zhang, Yajun; Li, Tingting; Ge, Huan; Xia, Shiming; Gu, Junfei; Zhang, Hao; Lü, Bing; Wu, Xiaoxia; Wang, Zhiqin; Yang, Jianchang; Zhang, Jianhua; Liu, Lijun

doi:10.1016/j.soilbio.2018.11.015

Cited by 85 publications

(42 citation statements)

References 51 publications

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“…Weidner et al ( 2015 ) suggested that high soil microbial diversity is favorable for positive plant-soil feedback and N nutrient supply in soil. Differences in biomass and root morphology among different cultivars of the same species may cause differences in the microbial diversity and abundance (Hui et al, 2017 ; Chen et al, 2019b ). For example, Jiang et al ( 2017b ), suggested that high-yielding cultivars have significantly increased root porosity and an abundance of specific microorganisms, indicating that their large roots and porous soil facilitate gas exchange in the rhizosphere soil, thereby affecting the rhizosphere bacterial community.…”

Section: Discussionmentioning

confidence: 99%

Effect of Two Different Sugarcane Cultivars on Rhizosphere Bacterial Communities of Sugarcane and Soybean Upon Intercropping

et al. 2021

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Intercropping of soybean and sugarcane is an important strategy to promote sustainable development of the sugarcane industry. In fact, our understanding of the interaction between the rhizosphere and bacterial communities in the intercropping system is still evolving; particularly, the influence of different sugarcane varieties on rhizosphere bacterial communities in the intercropping process with soybean, still needs further research. Here, we evaluated the response of sugarcane varieties ZZ1 and ZZ9 to the root bacterial community during intercropping with soybean. We found that when ZZ9 was intercropped with soybean, the bacterial diversity increased significantly as compared to that when ZZ1 was used. ZZ9 played a major role in changing the bacterial environment of the root system by affecting the diversity of rhizosphere bacteria, forming a rhizosphere environment more conducive to the growth of sugarcane. In addition, our study found that ZZ1 and ZZ9 had differed significantly in their utilization of nutrients. For example, nutrients were affected by different functional genes in processes such as denitrification, P-uptake and transport, inorganic P-solubilization, and organic P-mineralization. These results are significant in terms of providing guidance to the sugarcane industry, particularly for the intercropping of sugarcane and soybean in Guangxi, China.

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Section: Discussionmentioning

confidence: 99%

Effect of Two Different Sugarcane Cultivars on Rhizosphere Bacterial Communities of Sugarcane and Soybean Upon Intercropping

et al. 2021

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“…Plant roots and soil microbes have complex relationships and interactions that drive their contributions to soil respiration (De Vries et al, 2016;Fry et al, 2019). Autotrophic-rhizospheric respiration (R a+r ) is a function of roots respiring (root metabolic processes; i.e., autotrophic respiration) and the stimulated microbial activity in the rhizosphere (i.e., rhizospheric respiration) (Bardgett, 2017;Chen et al, 2019). Autotrophicrhizospheric respiration can range dramatically from 10 to 90% of total soil respiration in vegetated ecosystems (Hanson et al, 2000).…”

Section: Introductionmentioning

confidence: 99%

Root Functional Trait and Soil Microbial Coordination: Implications for Soil Respiration in Riparian Agroecosystems

et al. 2021

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Predicting respiration from roots and soil microbes is important in agricultural landscapes where net flux of carbon from the soil to the atmosphere is of large concern. Yet, in riparian agroecosystems that buffer aquatic environments from agricultural fields, little is known on the differential contribution of CO2 sources nor the systematic patterns in root and microbial communities that relate to these emissions. We deployed a field-based root exclusion experiment to measure heterotrophic and autotrophic-rhizospheric respiration across riparian buffer types in an agricultural landscape in southern Ontario, Canada. We paired bi-weekly measurements of in-field CO2 flux with analysis of soil properties and fine root functional traits. We quantified soil microbial community structure using qPCR to estimate bacterial and fungal abundance and characterized microbial diversity using high-throughput sequencing. Mean daytime total soil respiration rates in the growing season were 186.1 ± 26.7, 188.7 ± 23.0, 278.6 ± 30.0, and 503.4 ± 31.3 mg CO2-C m–2 h–1 in remnant coniferous and mixed forest, and rehabilitated forest and grass buffers, respectively. Contributions of autotrophic-rhizospheric respiration to total soil CO2 fluxes ranged widely between 14 and 63% across the buffers. Covariation in root traits aligned roots of higher specific root length and nitrogen content with higher specific root respiration rates, while microbial abundance in rhizosphere soil coorindated with roots that were thicker in diameter and higher in carbon to nitrogen ratio. Variation in autotrophic-rhizospheric respiration on a soil area basis was explained by soil temperature, fine root length density, and covariation in root traits. Heterotrophic respiration was strongly explained by soil moisture, temperature, and soil carbon, while multiple factor analysis revealed a positive correlation with soil microbial diversity. This is a first in-field study to quantify root and soil respiration in relation to trade-offs in root trait expression and to determine interactions between root traits and soil microbial community structure to predict soil respiration.

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“… Weidner et al (2015) suggested that high soil microbial diversity is conducive to positive plant–soil feedback and nitrogen supply in the soil. Differences in biomass and root morphology among different varieties of the same species may lead to differences in microbial diversity and abundance ( Hui et al, 2017 ; Chen et al, 2019 ). ZZ9 showed better agronomic traits than ZZ1 ( Table 1 ), which indicated that the sugarcane strains had different degrees of interaction with soybean in intercropping.…”

Section: Discussionmentioning

confidence: 99%

Effects of Sugarcane and Soybean Intercropping on the Nitrogen-Fixing Bacterial Community in the Rhizosphere

Liu

et al. 2021

Front. Microbiol.

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Intercropping between sugarcane and soybean is widely used to increase crop yield and promote the sustainable development of the sugarcane industry. However, our understanding of the soil microenvironment in intercropping systems, especially the effect of crop varieties on rhizosphere soil bacterial communities, remains poor. We selected two excellent sugarcane cultivars, Zhongzhe1 (ZZ1) and Zhongzhe9 (ZZ9), from Guangxi and the local soybean variety GUIZAO2 from Guangxi for field interplanting experiments. These two cultivars of sugarcane have good drought resistance. Rhizosphere soil samples were collected from the two intercropping systems to measure physicochemical properties and soil enzyme activities and to extract total soil DNA for high-throughput sequencing. We found that the diversity of the rhizosphere bacterial community was significantly different between the two intercropping systems. Compared with ZZ1, the ZZ9 intercropping system enriched the nitrogen-fixing bacteria, increasing the available nitrogen content by 18% compared with that with ZZ1. In addition, ZZ9 intercropping with soybean formed a more compact rhizosphere environment than ZZ1, thus providing favorable conditions for sugarcane growth. These results provide guidance for the sugarcane industry, especially for the management of sugarcane and soybean intercropping in Guangxi, China.

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Rice root morphological and physiological traits interaction with rhizosphere soil and its effect on methane emissions in paddy fields

Cited by 85 publications

References 51 publications

Effect of Two Different Sugarcane Cultivars on Rhizosphere Bacterial Communities of Sugarcane and Soybean Upon Intercropping

Effect of Two Different Sugarcane Cultivars on Rhizosphere Bacterial Communities of Sugarcane and Soybean Upon Intercropping

Root Functional Trait and Soil Microbial Coordination: Implications for Soil Respiration in Riparian Agroecosystems

Effects of Sugarcane and Soybean Intercropping on the Nitrogen-Fixing Bacterial Community in the Rhizosphere

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