In the last decade, industrial environments have been experiencing a change in their control processes. It is more frequent that control strategies adopt Artificial Neural Networks (ANNs) to support control operations, or even as the main control structure. Thus, control structures can be directly obtained from input and output measurements without requiring a huge knowledge of the processes under control. However, ANNs have to be designed, implemented, and trained, which can become complex and time-demanding processes. This can be alleviated by means of Transfer Learning (TL) methodologies, where the knowledge obtained from a unique ANN is transferred to the remaining nets reducing the ANN design time. From the control viewpoint, the first ANN can be easily obtained and then transferred to the remaining control loops. In this manuscript, the application of TL methodologies to design and implement the control loops of a Wastewater Treatment Plant (WWTP) is analysed. Results show that the adoption of this TL-based methodology allows the development of new control loops without requiring a huge knowledge of the processes under control. Besides, a wide improvement in terms of the control performance with respect to conventional control structures is also obtained. For instance, results have shown that less oscillations in the tracking of desired set-points are produced by achieving improvements in the Integrated Absolute Error and Integrated Square Error which go from 40.17% to 94.29% and from 34.27% to 99.71%, respectively.