The objective of this work was to determine the responses of tomato seed priming with CNMs (carbon nanomaterials), evaluating the changes in germination and biochemical compounds as well as the effect on the growth of tomato seedlings. Five concentrations of CNMs (10, 100, 250, 500, and 1000 mg L−1) were evaluated, as well as an absolute control and a sonicated control. The results showed that seed priming with CNMs did not affect the germination rate of the tomato seeds; however, it negatively affected the vigor variables, such as the root length (up to 39.2%) and hypocotyl biomass (up to 33%). In contrast, the root biomass was increased by the application of both carbon nanotubes and graphene up to 127% in the best case. Seed priming with carbon nanotubes (1000 mg L−1) decreased the plant height (29%), stem diameter (20%), fresh shoot biomass (63%), fresh root biomass (63%), and dry shoot biomass (71%). Seed priming with graphene increased the content of chlorophylls (up to 111%), vitamin C (up to 78%), β-carotene (up to 11 fold), phenols (up to 85%), and flavonoids (up to 45%), as well as the H2O2 content (up to 215%). Carbon nanotubes (CNTs) increased the enzymatic activity (phenylalanine ammonia lyase (PAL), ascorbate peroxidase (APX), glutathione peroxidase (GPX), superoxide dismutase (SOD), and catalase (CAT). In addition, seed priming with high concentrations of CNMs showed negative effects. Seed priming with carbon nanomaterials can potentially improve the development of the tomato crop; therefore, this technique can be used to induce biostimulation and provides an easy way to apply carbon nanomaterials.