We demonstrate the potential of perylene bisimide (PBI) for label-free sensing of organic molecules by investigating the change in electronic properties of five symmetric and asymmetric PBI derivatives, which share a common backbone, but are functionalised with various bay-area substituents. Density functional theory was combined with a Greens function scattering approach to compute the electrical conductance of each molecule attached to two gold electrodes by pyridyl anchor groups. We studied the change in their conductance in response to the binding of three analytes, namely TNT, BEDT-TTF and TCNE, and found that the five different responses provided a unique fingerprint for the discriminating sensing of each analyte. This ability to sense and discriminate was a direct consequence of the extended π system of the PBI backbone, which strongly binds the analytes, combined with the different charge distribution of the five PBI derivatives, which leads to a unique electrical response to analyte binding.Recently, it has been experimentally demonstrated that single PBI-based molecules can be attached to gold electrodes and their electrical conductance can bemeasured [29]. In the present paper our aim is to demonstrate that the extended π systems of PBIs make them ideal candidates for the single-molecule, label-free sensing of a variety of analytes. Chemical sensors that work as electronic noses or electronic tongues have attracted extensive attention, because they possess high sensitivity and selectivity towards target analytes, ranging from metal ions and anions to organic neutral chemicals and biological molecules [30][31][32][33]. Label-free methods for detecting small molecules are a desirable target technology, because they avoid the need for chemical modification or separation of the analytes, potentially leading to lower costs. Examples of label-free detection include micelle-based bacterial quorum sensing [23] aptamer-based sensing platforms [21], label-free, sequence specific DNA sensing based on fluorescence resonant energy transfer (FRET) [22], nuclear magnetic resonance [24,] nanoplasmonics [25] and surface enhanced Raman spectroscopy (SERS) [26]. However all of these reporting strategies require expensive detectors and are not shrinkable to sub-micron-scale devices and therefore the cost-lowering advantages of label-free sensing are not yet fully realised.In the present paper, our aim is to demonstrate room-temperature, label-free sensing at the single-molecule level by analysing the variation in electrical properties of the five PBI derivatives shown in figure 1, which possess the same PBI core, but with the following bay-area substituents: pyrrolidinyl (aPy-PBI, Py-PBI), tert-butylphenoxy (P-PBI), thiobutyl (S-PBI), and chlorine (Cl-PBI). Four molecules (Py-PBI, P-PBI, Cl-PBI, S-PBI) possess pyridyl anchor groups at opposite ends and are therefore symmetric. The fifth molecule (aPy-PBI) has a pyridyl anchor group on the top and a cyclohexyl anchor group on the bottom [29] and is asymmetric.
Py-PBI aPy-P...