Lotus japonicus was shown to contain the two nitrile glucosides rhodiocyanoside A and rhodiocyanoside D as well as the cyanogenic glucosides linamarin and lotaustralin. The content of cyanogenic and nitrile glucosides in L. japonicus depends on plant developmental stage and tissue. The cyanide potential is highest in young seedlings and in apical leaves of mature plants. Roots and seeds are acyanogenic. Biosynthetic studies using radioisotopes demonstrated that lotaustralin, rhodiocyanoside A, and rhodiocyanoside D are derived from the amino acid L-Ile, whereas linamarin is derived from Val. In silico homology searches identified two cytochromes P450 designated CYP79D3 and CYP79D4 in L. japonicus. The two cytochromes P450 are 94% identical at the amino acid level and both catalyze the conversion of Val and Ile to the corresponding aldoximes in biosynthesis of cyanogenic glucosides and nitrile glucosides in L. japonicus. CYP79D3 and CYP79D4 are differentially expressed. CYP79D3 is exclusively expressed in aerial parts and CYP79D4 in roots. Recombinantly expressed CYP79D3 and CYP79D4 in yeast cells showed higher catalytic efficiency with L-Ile as substrate than with L-Val, in agreement with lotaustralin and rhodiocyanoside A and D being the major cyanogenic and nitrile glucosides in L. japonicus. Ectopic expression of CYP79D2 from cassava (Manihot esculenta Crantz.) in L. japonicus resulted in a 5-to 20-fold increase of linamarin content, whereas the relative amounts of lotaustralin and rhodiocyanoside A/D were unaltered.Cyanogenic glucosides are widely distributed in the plant kingdom. They are present in more than 2,650 different plant species derived from about 550 genera and more than 130 families (Seigler, 1991) and these include ferns, angiosperms, and gymnosperms. Cyanogenic glucosides are b-glucosides of a-hydroxynitriles. When the subcellular structures of plant tissue containing cyanogenic glucosides are disrupted, e.g. by chewing insects, the cyanogenic glucosides are degraded by b-glucosidases and a-hydroxynitrilases. This results in concomitant release of toxic hydrogen cyanide, Glc, and an aldehyde or ketone. This binary system-two sets of components that separately are chemically inert-provides plants with an immediate chemical defense response to herbivores and pathogens that cause tissue damage (Møller and Seigler, 1999). Accordingly, cyanogenic glucosides are classified as phytoanticipins (VanEtten et al., 1994). Another suggested role for cyanogenic glucosides is as nitrogen storage compounds (Forslund and Jonsson, 1997;Busk and Møller, 2002).Cyanogenic glucosides are derived from the protein amino acids L-Val, L-Ile, L-Leu, L-Phe, or L-Tyr and from the nonprotein amino acid cyclopentenyl-Gly. The Val and Ile derived cyanogenic glucosides linamarin and lotaustralin usually cooccur and are widespread in nature (Seigler, 1975;Møller and Seigler, 1999). The biosynthetic pathway for cyanogenic glucosides has been extensively studied in a number of plant species including sorghum (Sorghum bicolor), c...