is a gram-negative pathogenic bacterium in aquaculture that can cause hemorrhagic septicemia in fish. Many secreted proteins have already been identified as virulent factors of . Moreover, since virulent phenotypes are based on the expression regulation of virulent genes, understanding the expression profile of virulent genes is important. A quantitative RT-PCR is one of the preferred methods for determining different gene expressions. However, this requires the selection of a stable reference gene in, which has not yet been systematically studied. Accordingly, this study evaluated nine candidate reference genes (, ,, ,, ,, , and) using the Excel-based programs BestKeeper, GeNorm, and NormFinder under different culture conditions. The results showed that was more stable than the other genes at different culture growth phases. However, at the same culture time, was identified as the reference gene under the conditions of different strains, different culture media, and infection, whereas was identified under the condition of different temperatures. Thus, in experiments, the expression of and in was analyzed by RT-qPCR using ,, and as the reference genes. The results showed that was the most suitable reference gene in this analysis, and that using unsuitable reference genes resulted in inaccurate results.