The 4-aminoquinoline bisquinoline piperaquine is an important partner drug in one of the presently recommended artemisinin combination therapies. Recent clinical trials have confirmed its high efficacy in combination with dihydroartemisinin. Resistance to piperaquine alone has, however, been documented. Amplification in copy number of the Plasmodium falciparum multidrug resistance locus on chromosome 5, containing the pfmdr1 gene, has been shown to confer resistance to structurally unrelated antimalarials. Through the determination of the 50% inhibitory concentrations (IC 50 s) and IC 90 s for piperaquine and chloroquine in a set of 46 adapted P. falciparum cultures originating from the Thai-Burmese border, we have characterized the regions around the pfmdr1 gene and identified a significant association between the presence of pfmdr1 duplications and enhanced sensitivity to piperaquine (P ؍ 0.005 for IC 50 and P ؍ 0.002 for IC 90 ) and chloroquine, reaching statistical significance at IC 90 s (P ؍ 0.026). These results substantiate the potential importance of pfmdr1 copy number amplifications in the efficacy of the combination therapy piperaquine-dihydroartemisinin. It supports the rational use of 4-aminoquinolines and artemisininbased compounds, as they independently select for mutually incompatible combinations of mutations.A rtemisinin combination therapy (ACT) is instrumental in the global decrease of Plasmodium falciparum malaria in recent years. However, P. falciparum resistance to several partner drugs, namely, artesunate-mefloquine (25), artemether-lumefantrine (26, 31), and artesunate-amodiaquine (15), has been documented. These early signs have been associated with decreased parasite responses to the slowly eliminated partner drugs, a phenomenon believed to be accelerated in circumstances of high transmission due to the exposure of reinfecting parasites to subtherapeutic concentrations (14).A more recent ACT, dihydroartemisinin-piperaquine (DHA-PPQ), has been widely used in Southeast Asia and is now ready to be launched in sub-Saharan Africa. PPQ is a bisquinoline, structurally a 4-aminoquinoline-based antimalarial like chloroquine (CQ). Piperaquine is not a recent newcomer, having been extensively used in monotherapy regimens in the southern regions of China in the 1970s and 1980s, as a response to the rise of CQ resistance. Later, it was adopted by the national Vietnamese malaria control program in several formulations (9). The most recent development of PPQ-based ACT is commercially known as Artekin (Hollekyn Pharmaceuticals, China) or Eurartesim (SigmaTau, Italy), each tablet containing 40 mg dihydroartemisinin plus 320 mg piperaquine phosphate.DHA-PPQ has shown excellent efficacy in recent clinical trials in Africa (1,4,17), making it a promising fixed-dose formulation for malaria treatment on the continent. Nevertheless, the PPQ long elimination half-life of Ͼ4 weeks after the standard 3-day course (2.25 mg/kg [of body weight] DHA and 18 mg/kg of piperaquine phosphate per day) raises concer...