2010
DOI: 10.1111/j.1440-169x.2009.01157.x
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Single‐cell gene profiling of planarian stem cells using fluorescent activated cell sorting and its “index sorting” function for stem cell research

Abstract: To achieve an integrated understanding of the stem cell system of planarians at both the cellular and molecular levels, we developed a new method by combining ''fluorescent activated cell sorting (FACS) index sorting'' analysis and single-cell reverse transcription-polymerase chain reaction (RT-PCR) to detect the gene expression and cell cycle state of stem cells simultaneously. Single cells were collected using FACS, and cDNAs of each cell were used for semi-quantitative RT-PCR. The results were plotted on th… Show more

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Cited by 112 publications
(129 citation statements)
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References 62 publications
(188 reference statements)
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“…Purification hence heterogeneous by definition, the X1 population appears to be rather homogeneous, as many genes required for proper pASCs function are expressed by the entire stem cell population (reviewed in Gentile et al, 2011). However, there is some evidence for heterogeneity of the X1 population at both the ultrastructural (Higuchi et al, 2007) and the transcript levels (Eisenhoffer et al, 2008;Hayashi et al, 2010;Pearson and Sanchez Alvarado, 2010;Scimone et al, 2010).…”
Section: Introductionmentioning
confidence: 99%
“…Purification hence heterogeneous by definition, the X1 population appears to be rather homogeneous, as many genes required for proper pASCs function are expressed by the entire stem cell population (reviewed in Gentile et al, 2011). However, there is some evidence for heterogeneity of the X1 population at both the ultrastructural (Higuchi et al, 2007) and the transcript levels (Eisenhoffer et al, 2008;Hayashi et al, 2010;Pearson and Sanchez Alvarado, 2010;Scimone et al, 2010).…”
Section: Introductionmentioning
confidence: 99%
“…These findings, obtained at the end of the seventies A B Salò et al, 2009;Abril et al, 2010;Blythe et al, 2010;Hayashi et al, 2006Hayashi et al, , 2010Shibata et al, 2010;Aboobaker, 2011;Adamidi et al, 2011;Fernández-Taboada et al, 2011;Gentile et al, 2011;Qin et al, 2011). European planarian labs recently joined together by creating EuroPlanNet (www.europlannet.org), which brings together scientists with cross-disciplinary planarian expertise.…”
Section: What Are Your Most Interesting Findings and What Improvementmentioning
confidence: 95%
“…To examine the relationship between DjP2X-A and cell proliferation, we analyzed the feeding-induced changes of two proliferative cell marker genes and DjP2X-A, by quantitative RT-PCR (qRT-PCR). We used Djpcna and DjMCM2 as proliferative cell marker genes, which are mainly expressed in the Sphase of the cell cycle in neoblasts (Hayashi et al, 2010). The expression level of Djpcna rapidly increased and peaked 12-24 hours after feeding, stayed above the steady state level until the third day after feeding, and reached a steady state level within 7 days (Fig.…”
Section: Djp2x-a Is Involved In Repressing Post-feeding Mitotic Burstsmentioning
confidence: 99%