[3H]Muscimol and [3H]flunitrazepam binding activities have been solubilized from bovine cortex using the ionic detergent sodium deoxycholate. The soluble receptor proteins were shown to bind [3H]muscimol with a dissociation constant, Kd, of 12 nM and a binding capacity (B,,, The two binding activities were also found to comigrate after sedimentation in a sucrose density gradient. The hydrodynamic properties of the assumed protein-detergent complexes were determined by gel filtration and sedimentation through gradients of sucrose in H2O or 'HzO. Under the conditions employed, the parameters for both the putative y-aminobutyric acid and benzodiazepine receptors were : partial specific volume, 0.73 ml 8 -l ; sedimentation coefficient, 12.5 S; molecular weight, 355000; and frictional ratio 1.46. These observations are consistent with the conclusion that the majority of both binding activities solubilized in deoxycholate reside in a single macromolecular complex. However, Triton X-100 selectively solubilized the benzodiazepine binding activity. This suggests that the two binding activities can be at least partially separated.y-Aminobutyric acid is the major inhibitory neurotransmitter in mammalian brain and it is thought to mediate its transmission effects through a postsynaptic membrane protein, the y-aminobutyrate receptor [I ,2]. Several groups have demonstrated the presence of high-affinity, saturable, specific binding of y-amin~[~H]butyric acid and its pharmacologically active analogues such as muscirnol to brain synaptic membranes [3 -51 and these binding sites are recognized as the y-aminobutyrate receptor protein(s). Recent evidence has shown that y-aminobutyric acid and structurally related compounds can enhance the specific binding in brain of the benzodiazepine ligands [6], a class of compounds that possess anxiolytic, anticonvulsant, sedative-hypnotic, muscle relaxant and central nervous system depressant properties [7,8]. Benzodiazepines can protect y-aminobutyrate binding activity against heat inactivation and denaturation by protein reagents [9]. Thus, it has been suggested that the y-aminobutyrate receptor may be a complex multi-subunit protein that mediates central nervous system mechanisms which can be modulated via allosteric interactions of the benzodiazepines ; another class of compounds, the barbiturates, also modulate this receptor complex [lo].Proteins binding both y-aminobutyric acid [ll -151 and benzodiazepines [14 -181 have been solubilized by mild detergents. They were shown to possess dissimilar apparent sizes under some conditions ; thus the major protein with y-aminobutyrate-binding activity in deoxycholate solution showed an apparent molecular weight of 900 000 compared to globular standard proteins [I I] while the protein with benzodiazepinebinding activity in Lubrol or Triton X-100 solution reportedly had a smaller apparent M , of approximately 200000 [16,17]. More recent reports that appeared during the preparation of this manuscript suggest that the two binding proteins show simi...