Potassium-channel-blocking scorpion toxins (A-K-toxins) have been shown to be valuable tools for the study of potassium channels. Here we report two toxins, cobatoxin 1 and 2, of 32 amino acids, containing three disulphide bridges, that were isolated from the venom of the Mexican scorpion Centruroides noxius. Their primary sequences show less than 40% identity to other A-K-toxins. It is therefore proposed that they belong to subfamily 9. The cDNA of cobatoxin 1 encodes a putative signal peptide, a putative short propeptide, the mature peptide and two amino acids that are processed to leave cobatoxin 1 amidated at the C-terminus. In rat brain synaptosomal membranes cobatoxin 1 and cobatoxin 2 bind to a common binding site of A-K-toxins with K i values of 109 pM and 87 pM, respectively. Moreover, they block the Shaker and K V 1.1 K ϩ channels with moderate affinities, with K d values of around 0.7 µM and 4.1 µM (Shaker) and 0.5 µM and 1.0 µM (K V1.1), respectively. A three-dimensional model of cobatoxin 1 was generated and used to interpret the obtained functional data on a structural basis.Keywords : A-K-toxin ; Centruroides noxius ; cobatoxin; potassium channel; scorpion toxin.Potassium channels form a large family of integral mem-surements and mutational analyses, that they block K ϩ channels from the external side, occluding the channel pore [19Ϫ22]. Disbrane proteins that are present in almost every living cell. They play a key physiological role by setting the resting potential and placement experiments on rat brain synaptosomes provide evidence that the receptor site is shared by mast-cell-degranulating shaping bioelectric signals [1,2] PVIIA [27]. Thus, despite these peptides presenting very different three-dimensional folds [14, 28Ϫ34], they seem to act on Neurotoxins that selectively and sensitively block potassium channels (K-toxins) form a structurally diverse group, from K ϩ channels in a similar way. The only exception described has been hanatoxin [35,36]. small peptides to rather complex proteins. Some of them have been shown to be valuable pharmacological tools to study the Scorpion K-toxins were successfully used to identify the pore-forming region of K ϩ channels [20,37], to clarify the strucmolecular structure, function and diversity of K ϩ channels [8,9]. They can be grouped, based on the similarity of their size tural subunit stoichiometry [38], and to identify the functional stoichiometry of inactivation of K ϩ channels [39]. They served and disulphide-bond pattern, into seven groups, which generally reflect their natural origin : scorpion toxins of 31Ϫ39 amino as molecular calipers to measure the dimension of the outer vestibule of the pore of particular channels [40Ϫ47]. Furthermore, acids [9]; dendrotoxins from mamba snakes and kalicludines from sea anemone, of 57Ϫ60 amino acids [10Ϫ12] ; small pep-they were used for the purification, isolation [24, 48Ϫ50] and pharmacological classification of K ϩ channels [8], and to study tides of 18Ϫ22 amino acids isolated from bee venom, including ma...