Intertidal wetlands capture and store carbon (C) for long periods of time, helping to reduce the concentration of CO2 in the atmosphere. Yet the processes, which govern the decomposition and subsequent long‐term storage of organic matter (OM) and C in these habitats, remain poorly understood. The Tea Bag Index (TBI) uses a standardized OM (green and Rooibos tea) and has the potential to shed light on OM decomposition across habitats, including saltmarshes. Here, we apply the TBI method at two saltmarshes within the same estuary with the aim of (i) reducing the influence of climatic variables and (ii) determining the role of the environment, including the soil characteristics, in the decomposition of OM. We extended the standard (3 months) incubation period over a full year in order to investigate the longer‐term decomposition processes at each site. The initial results partially support previous studies that the early stages of decomposition (leaching of the water‐soluble fraction) is governed by climatic conditions, but may be further enhanced by tidal flushing in saltmarshes. By extending the incubation period, we observed the initiation of midstage OM decomposition (cellulose degradation) upon which the soil characteristics appear to be the dominant control. These results highlight the importance of long‐term TBI incubations to understand early‐stage OM decomposition. The relationship between tea mass (OM) loss and C loss in these intertidal environments is not straightforward, and we would caution the use of the TBI as a direct universal proxy for soil C degradation in such intertidal wetlands.