4-Halopyridines are developed herein as selective, tunable, and “switchable” covalent protein modifiers for use in the development of chemical probes. Non-enzymatic reactivity of 4-chloropyridine with amino acids and thiols is ranked with respect to common covalent protein modifying reagents and found to have reactivity similar to that of acrylamide, but can be switched to a reactivity similar to that of iodoacetamide upon stabilization of the positively charged pyridinium. Diverse fragment-sized 4-halopyridines inactivate human dimethylarginine dimethylaminohydrolase-1 (DDAH1) through covalent modification of the active-site Cys, acting as quiescent affinity labels that require “off pathway” catalysis via a stabilization of the protonated pyridinium by a neighboring Asp residue. A series of 2-fluoromethyl-substituted 4-chloropyridines demonstrate that pKa and kinact/KI can be predictably varied over several orders of magnitude. Covalent labeling of proteins in an E. coli lysate is shown to require folded proteins, indicating that alternative proteins can be targeted and modification is likely to be catalysis-dependent. 4-Halopyridines, and quiescent affinity labels in general, represent an attractive strategy to develop reagents with “switchable” electrophilicity as selective covalent protein modifiers.