We consider a setting, where the output of a linear dynamical system (LDS) is, with an unknown but fixed probability, replaced by noise. There, we present a robust method for the prediction of the outputs of the LDS and identification of the samples of noise, and prove guarantees on its statistical performance. One application lies in anomaly detection: the samples of noise, unlikely to have been generated by our estimate of the unknown dynamics, can be flagged to operators of the system for further study.