The 36-amino-acid neuropeptide Y (human), which is one of the most potent vasoconstrictors and which exhibits a number of other biological functions, has been synthesized using automated peptide synthesis. The optimized method, using 9-fluorenylmethoxycarbonyl protecting and singlestep coupling, yielded the crude product in 90% purity allowing for single-step reversed-phase HPLC purification to >98% purity and a high overall yield (50%). The hormone was characterized by several chromatographic methods, ion-spray mass spectroscopy and Edman degradation. The conformation of human neuropeptide Y was examined by CD, NMR and computer simulations. The CD measurements in trifluoroethanol/water (9: 1) show a large percentage of a-helix. Variation of concentration, from 0.5 pM increasing up to the 1 mM used for NMR measurements, indicates no evidence for aggregation. In the same solvent system, the NMR line widths were very broad and therefore the resonance assignment was achieved with the exclusive use of two-dimensional NOE spectra. The 248 clearly distinguishable NOES from the NMR study were used in distance geometry calculations and the resulting structures were refined with restrained molecular dynamics. The results indicate an a-helix extending from Argl9 to Gln34. For the N-terminal half of the molecule no regular structure was observed.Neuropeptide Y is a 36-amino-acid C-terminally amidated peptide isolated from porcine brain by Tatemoto et al. in 1982 [l]. It is widely distributed in the central and peripheral nervous system [2, 31. Within the central nervous system neuropeptide Y is involved in appetite [4], stress [5] and blood pressure [6]. In the peripheral nervous system neuropeptide Y has been shown to be a potent and long-lasting vasoconstrictor [7], acting as a cotransmitter and regulator at noradrenergic neurons [8]. Recent studies have indicated that neuropeptide Y has an analgesic effect [9].The primary structure of porcine neuropeptide Y has been determined by sequencing [lo] and synthesis [ll]. Human neuropeptide Y has a Met residue at position 17 instead of Leu. Earlier solid-phase syntheses of porcine neuropeptide Y were performed using Na-tert-butyloxycarbonyl (Boc) Abbreviutions. ADPV, 5-(4'-aminomethyl-3',5'-dimethoxyphenoxy)valeric acid; BOP, benzotriazol-1-yl-oxy-tris(dimethy1amino)-phosphonium hexafluorophosphate; Fmoc, 9-fluorenylmethoxycarbonyl; HOBt, 1-hydroxybenzotriazole; Mtr, 2,3,6-trimethyl-4-methoxysulfonylbenzene; NOESY, two-dimensional nuclear Overhauser effect spectroscopy; TBTU, 2-(I H-benzotriazol-1 -yl)-1 .I ,3,3-tetramethyluronium tetrafluoroborate; tBu, tert-butyl.
benzotriazol-l-yl-oxy-tris(dimethylamino)-phosphonium hexafluorophosphate (BOP) activation and iV-Boc protection [18].A combined method was also described for the (1 -35)-peptide of human neuropeptide Y using solid-phase synthesis by diisopropylcarbodiimide and 1 -hydroxybenzotriazole (HOBt) activation and W-9-fluorenylmethoxycarbonyl (Fmoc) protection followed by enzymatic attachment of the C-terminal tyrosine...