Streptomyces coelicolor A3(2) and Streptomyces violaceoruber Tui22 produce the antibiotics actinorhodin and granaticin, respectively. Both the aglycone of granaticin and the half-molecule of actinorhodin are derived from one acetyl coenzyme A starter unit and seven malonyl coenzyme A extender units via the polyketide pathway to produce benzoisochromane quinone moieties with identical structures (except for the stereochemistry at two chiral centers). In S. coelicolor and S. violaceoruber, the type II polyketide synthase (PKS) is encoded by clusters of five and six genes, respectively. We complemented a series of S. coelicolor mutants (act) defective in different components of the PKS (actI for carbon chain assembly, actIII for ketoreduction, and actVII for cyclization-dehydration) by the corresponding genes (gra) from S. violaceoruber introduced in trans on low-copy-number plasmids. This procedure showed that four of the act PKS components could be replaced by a heterologous gra protein to give a functional PKS. The analysis also served to identify which of three candidate open reading frames (ORFs) in the actl region had been altered in each of a set of 13 actI mutants.It also proved that actI-ORF2 (whose putative protein product shows overall similarity to the 0-ketoacyl synthase encoded by actI-ORF1 but whose function is unclear) is essential for PKS function. Mutations in each of the four complemented act genes (actI-ORF1, actI-ORF2, actIII, and actVII) were cloned and sequenced, revealing a nonsense or frameshift mutation in each mutant.The polyketides are derived from simple carboxylic acid precursors by a biosynthetic mechanism similar to that of the fatty acids (3, 16). One of the most compelling reasons for studying polyketide biosynthesis is to elucidate the genetic and biochemical variables of the polyketide synthase (PKS) that determine the huge variety of product structures. Interestingly, the organization of the erythromycin PKS (a type I system) (4, 5) suggests an overall mechanistic strategy for the construction of macrolide chains. There appears to be a linear correspondence between the functional modules of the enzyme and the chemical reactions required on the growing acyl substrate along the three multifunctional PKS proteins. In type II systems, on the other hand, a clear mechanistic explanation for the construction of the polyketide chain does not exist. Unlike the erythromycin system, type II systems require that specific proteins (at least the 1-ketoacyl synthase and also acyl carrier protein [ACP]) in the multicomponent PKS accept the products of successive steps in chain elongation as substrates during each round of chain building. It is this aspect of polyketide biosynthesis that has become one of the major challenges; i.e., which PKS components in type II systems contribute to the overall structure of the polyketide molecule, and how does this control (or programming) take place?The benzoisochromane quinone class of antibiotics produced by Streptomyces spp. represents a system favorable...