Please cite this article as: Sumbayev, V.V., Jensen, J.K., Hansen, J.A., Andreasen, P.A., Novel modes of oestrogen receptor agonism and antagonism by hydroxylated and chlorinated biphenyls, revealed by conformation-specific peptide recognition patterns, Molecular and Cellular Endocrinology (2007), doi:10.1016/j.mce.2008 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. defined by X-ray crystal structure analysis of receptors in complex with the side chain-less 5,11-cis-diethyl-5,6,11,12-tetrahydrochrysene-2,8-diol (THC). We have now used the ability of peptides selected from phagedisplayed peptide libraries to bind conformation-specifically to oestrogen receptor- and - LBDs to analyse conformations induced by THC and a group of chlorinated biphenyls and their aryl-hydroxylated metabolites, suspected of being environmental chemical disruptors. In oestrogen receptor- THC defined a "passive antagonist" peptide recognition pattern, which was also induced by several antagonistic hydroxylated biphenyls, while a clearly different peptide recognition pattern was induced by their chlorinated agonistic counterparts. In oestrogen receptor-, THC induced a conformation similar to that induced by oestriol and other oestrogen receptor- agonists, which, as evaluated by site-directed mutagenesis, have a functionally important interaction with oestrogen receptor- residue His524. We conclude that the peptide recognition pattern can be used to used classify suspected environmental endocrine disruptors according the oestrogen receptor-and -conformations they induce.