Increased atmospheric CO 2 was shown to affect a variety of physiological processes in plants, including photosynthesis and growth with repercussions on crop yield and nutritive value. Perennial alfalfa (Medicago sativa L.) is a sustainable crop with a deep root system, living in symbiosis with rhizobium for nitrogen (N) fixation. The objective of the project was to determine the combined effects of elevated CO 2 and rhizobial strains on photosynthesis, growth, N fixation, and nutritive value of alfalfa, and on soil microflora. Alfalfa inoculated with two different strains of rhizobia (Sinorhizobium meliloti strains A2 and NRG34) was grown 2 months at day/night temperatures of 22/ 17°C under either 400 (near ambient) or 800 (elevated) µmol mol −1 of CO 2 . The photosynthetic response of alfalfa to elevated CO 2 differed according to the rhizobial strain. At the end of the experiment, elevated CO 2 stimulated photosynthetic rates by 50% in plants associated with A2 but there was no significant increase in plants nodulated with NRG34. Nitrogenase activity (+38%) and shoot growth (+60%) were stimulated under 800 µmol mol −1 of CO 2 for alfalfa inoculated with both strains. Root dry weight was significantly higher at 800 µmol mol −1 of CO 2 only with strain A2. Fibre concentration decreased in response to elevated atmospheric CO 2 in alfalfa inoculated with strain A2 resulting in plant material with greater nutritive value when inoculated with A2 compared to NRG34. In the soil, elevated CO 2 increased the proportion of fungi in the microbial community while decreasing Gram − bacteria. For alfalfa inoculated with rhizobial strain A2, photosynthetic rates, nitrogenase activity, and growth were all stimulated by increased atmospheric CO 2 compared to less consistently positive responses to elevated CO 2 when inoculated with NRG34. Our results show that it is possible to identify rhizobial strains to improve plant performance under predicted future CO 2 concentrations with no negative effect on nutritive value.