This study presents detrital zircon U‐Pb analyses of 23 samples of the Cycladic Blueschist Unit (CBU) from Kea, Kythnos, and Serifos islands, as well as the Lavrion Peninsula of SE Attica. The maximum depositional ages (MDA) and age distributions of detrital zircon U‐Pb dates are used to correlate metasediments between the islands considered herein and infer their provenance. Two distinct detrital zircon U‐Pb age distributions are found in CBU metasediments: “Proterozoic,” comprised of >40% Neoproterozoic zircons with Triassic‐Early Jurassic maximum depositional ages and “Paleozoic,” containing >30% Paleozoic zircons and yielding Late Jurassic‐Cretaceous MDAs. Proterozoic affinity metasediments are rift margin deposits derived from the northern Gondwanan margin. Paleozoic metasediments are flysch sediments most probably sourced from the Internal Hellenides. This metamorphosed flysch forms a distinct marker horizon found in a similar structural position in Lavrion, Kythnos, and Serifos. Based on lithologic correlation, sediment provenance, and MDA estimates, the CBU of Kythnos is correlative to the Lavrion Schists of Attica. On the islands of Serifos and Kythnos and within the Lavrion Schists only young‐on‐old relationships exist between rocks based on MDA estimates.