DNA probes containing the switch region (S) associated with the human immunoglobulin heavy chain ,u gene were used to investigate polymorphisms in the germ-line human DNA. Six polymorphisms, detected by a single restriction enzyme (Sst I) are described. Linkage studies in 29 families show that five of the six polymorphisms, although relatively unassociated in random individuals, segregate in complete linkage one to the other and to Gm allotypes (markers on the heavy chain of IgG), while the sixth segregates independently. Altogether, when one considers the DNA markers at the five closely linked loci and the IgGI and IgG3 heavy chain allotypes, 33 different haplotypes have been described; of these, 28 are detected by the DNA polymorphism alone. Study of 158-187 random haplotypes showed strong linkage disequilibrium only between one DNA polymorphism (Sst A) and Gm. Of the polymorphic Sst I loci, one, SstE [associated with 2.2-to 2.7-kldobase (kb) fragments], is included in the As chain S region (S.,); another, Sst A (6.8-7.4 kb), must be very close to the yl-y3 chain gene cluster. Based on studies of an IgE human myeloma, a third polymorphism, Sst C (4.8-5.5 kb), should map 3' of the active e chain gene. An Sst I restriction enzyme map of phage clones carrying the two a chain genes indicates that Sst A and Sst C loci probably overlap with the cl and a2 S regions, respectively. Both deletion/duplications and point mutations were detected.Polymorphisms described in human immunoglobulin heavy chains are thus far limited to variation detected in protein antigenicity and sequence (1). Observations in mice indicate the existence of individual heterogeneity at the DNA germ-line level (2, 3). The possibilities offered by the study of individual variation at the DNA level by restriction enzyme analysis (4, 5) have prompted us to initiate a search for germ-line variation in the immunoglobulin heavy chain gene regions. We show that a single probe tested with a single enzyme can demonstrate polymorphisms at many loci. This is due to the fact that DNA sequences contained in the probe are repeated (with some variation) before several immunoglobulin heavy chain genes within the so-called "switch" (S) regions. The S region derives its name from its putative function in the somatic chromosome rearrangements involved in the "heavy chain switch." This phenomenon involves a transition from production of IgM to that of IgG, IgE, or IgA during the life of a B lymphocyte without changing the antigen specificity of the molecule (6, 7). This is believed to be the result of DNA deletions removing the DNA segment between the heavy chain variable region gene and the constant region gene actually used for antibody production (8, 9), after somatic recombination between the homologous S regions located 5' ofmost immunoglobulin genes. These S regions include multiple tandem repeats of sequences like G-A-G-C-T,
G-G-G-G-T (10-14), and Y-A-G-G-T-T-C (15). The numerous polymorphisms we find allow us to analyze the genetic recombination in ...