Sarcolipin (SLN), a 31 amino acid integral membrane protein, regulates SERCA1a and SERCA2a, two isoforms of the sarco(endo)plasmic Ca-ATPase, by lowering their apparent Ca 2+ affinity and thereby enabling muscle relaxation. SLN is expressed in both fast-twitch and slow-twitch muscle fibers with significant expression levels also found in the cardiac muscle. SLN shares ∼30% identity with the transmembrane domain of phospholamban (PLN), and recent solution NMR studies carried out in detergent micelles indicate that the two polypeptides bind to SERCA in a similar manner. Previous 1D solid-state NMR experiments on selectively 15 N-labeled sites showed that SLN crosses the lipid bilayer with an orientation nearly parallel to the bilayer normal. With a view toward the characterization of SLN structure and its interactions with both lipids and SERCA, herein we report our initial structural and topological assignments of SLN in mechanically oriented DOPC/DOPE lipid bilayers as mapped by 2D 15 N PISEMA experiments. The PISEMA spectra obtained on uniformly 15 N-labeled protein as well as 15 N-Leu, 15 N-Ile and 15 N-Val map the secondary structure of SLN and, simultaneously, reveal that SLN exists in two distinct topologies. Both the major and the minor populations assume an orientation with the helix axis tilted by ∼23°with respect to the lipid bilayer normal, but vary in the rotation angle about the helix axis by ∼5°. The existence of the multiple populations in model membranes may be a significant requirement for SLN interaction with SERCA.The integral membrane protein sarcolipin (SLN) is expressed in both fast-twitch and slow-twitch muscle fibers. Recently, significant expression levels of SLN have been identified in cardiac muscle, increasing interest in this protein.In rats and mice, SLN expression is restricted to the heart and skeletal muscle, whereas in humans and rabbits, a different expression pattern is observed (1-4). The different localization pattern amongst species has been attributed to sequence variations in the N-terminal and/or transmembrane residues of SLN. MacLennan and co-workers found that the highly conserved C-terminal tail (RSYQY) of SLN is responsible for the localization of SLN in the endoplasmic reticulum (5).The specific role of SLN in the regulation of heart muscle has yet to be fully understood. One hypothesis is that SLN increases the rate of the leakage of Ca 2+ into the lumen, augmenting ATP hydrolysis mediated heat production (6, 7). A second hypothesis is that SLN physically interacts with SERCA2a in tandem with phospholamban (PLN), its functional homolog, constituting a superinhibitory complex (8).In support of the latter hypothesis, in vivo and in vitro experiments show that SLN alone lowers SERCA's apparent Ca 2+ affinity in a manner similar to that by PLN (9), whereas the simultaneous reconstitution of SLN and PLN produces a superinhibitory effect on SERCA (8).Initially, no posttranslational modifications were identified in SLN co-purified with SERCA (10), leading to the ...