The climbing plant
Cynanchum rostellatum
(Turcz.) Liede & Khanum is widely distributed throughout Korea and Northeast Asia as a member of the Apocynaceae family. Although this plant has a high value in medicinal and industrial purposes, genetic research on this plant is insufficient. This study announces the complete plastid genome (plastome) sequence of
C. rostellatum
with 663× mean coverage, which was assembled using 763 Mbp short-read data generated by the Illumina HiSeq X platform. The
C. rostellatum
plastome was 158,018 bp in length and displayed the typical quadripartite structure composed of the large single-copy (LSC) region (89,058 bp), the small single-copy (SSC) region (18,718 bp), and a pair of inverted repeat (IR) regions (25,116 bp). A total of 129 genes have been annotated, including 84 protein-coding genes, 37 transfer RNA genes, and eight ribosomal RNA genes. Phylogenetic analysis indicated the genus
Cynanchum
including 12
Cynanchum
plastome sequences, was monophyletic and was located within the sub-family Asclepiadoideae. Two
C. rostellatum
plastomes, including the plastome assembled in this study, formed a subclade and were sister to the
C. thesioides
plastome, whereas the other
C. rostellatum
, which was previously reported one, was located within the clade of
C. wilfordii
and
C. bungei
.