Atlanto-occipital dislocation (AOD) is a craniocervical injury that has serious neurological consequences and is often fatal. High-speed blunt trauma, such as motor vehicle accidents, that extend and put traction on the head can cause this injury. The current recommendation for diagnosis is to measure the condyle-C1 interval (CCI) using a computed tomography (CT) scan in the coronal plane and more recently in the sagittal plane. We report the case of a patient who suffered a motor vehicle accident and had concomitant AOD and atlanto-axial dislocation. In this particular case, the CCI method failed to diagnose AOD and the diagnosis was made using the basion-dens interval (BDI) and other methodologies, as well as the presence of ligamentous disruption at the craniovertebral junction (CVJ) on magnetic resonance imaging (MRI).A 19-year-old female suffered a motor vehicle accident in which she was ejected from the car. Her neck was immobilized on the scene and she was brought to the emergency department complaining of neck pain. CT of the cervical spine showed concomitant atlanto-occipital and atlanto-axial dissociation. MRI of the cervical spine confirmed the diagnosis with total ligamentous disruption at the CVJ and distraction of the atlanto-axial joints bilaterally. While the CCI was normal, the BDI was diagnostic of AOD.The current recommendations for using the CCI interval method may not diagnose AOD in the presence of associated atlanto-axial dislocation. Other methodologies should be employed including BDI and basion-axial interval (BAI) as well as MR imaging showing ligamentous disruption.