bWe previously reported that the Chlamydia trachomatis outer membrane complex protein B (OmcB) was partially processed in Chlamydia-infected cells. We have now confirmed that the OmcB processing occurred inside live cells during chlamydial infection and was not due to proteolysis during sample harvesting. OmcB processing was preceded by the generation of active CPAF, a serine protease known to be able to cross the inner membrane via a Sec-dependent pathway, suggesting that active CPAF is available for processing OmcB in the periplasm. In a cell-free system, CPAF activity is both necessary and sufficient for processing OmcB. Both depletion of CPAF from Chlamydia-infected cell lysates with a CPAF-specific antibody and blocking CPAF activity with a CPAF-specific inhibitory peptide removed the OmcB processing ability of the lysates. A highly purified wild-type CPAF but not a catalytic residue-substituted mutant CPAF was sufficient for processing OmcB. Most importantly, in chlamydial culture, inhibition of CPAF with a specific inhibitory peptide blocked OmcB processing and reduced the recovery of infectious organisms. Thus, we have identified OmcB as a novel authentic target for the putative chlamydial virulence factor CPAF, which should facilitate our understanding of the roles of CPAF in chlamydial biology and pathogenesis.C hlamydia trachomatis is a major cause of bacterial sexually transmitted diseases in the United States (1), which, if untreated, can lead to long-term complications such as pelvic inflammatory diseases, ectopic pregnancy, and infertility (2). It is thought that the inflammatory responses induced by the obligate intracellular growth of C. trachomatis significantly contribute to the pathogenicity (3-5). The C. trachomatis organisms initiate their intracellular life by invading epithelial cells in the form of elementary bodies (EBs). The intracellular EBs rapidly differentiate into reticulate bodies (RBs) that are metabolically active and able to proliferate. The progeny RBs have to differentiate back into EBs to exit the infected cells and spread to new cells. The EB-to-RB and RB-to-EB conversions require ϳ5-fold volume changes in the bacteria's size. It is not known how these large volume alterations are achieved. Nevertheless, the intracellular life of C. trachomatis organisms occurs strictly inside cytoplasmic vacuoles termed inclusions and takes 48 to 72 h to complete in cell culture systems, during which the intrainclusion chlamydial organisms secrete numerous proteins including the serine protease CPAF via a Secdependent pathway and inclusion membrane proteins via a type III secretion system (6-9). Despite many advances in chlamydial biology, the precise molecular mechanisms of how chlamydial organisms invade epithelial cells, how the intracellular organism differentiation is regulated, and how the intrainclusion organisms communicate with host cells remain unknown.The chlamydial outer membrane complex protein B (OmcB) is an abundant outer membrane protein (10, 11) and highly conserved among...