The complete mitochondrial genome of yellowfin seabream, <i>Acanthopagrus latus</i> (Percoiformes, Sparidae) from Beibu Bay

Pan, Chuanyan; Gao, Chongmin; Chen, Tao; Chen, Xiuli; Yang, Chunling; Zeng, Dingyuan; Feng, Pengfei; Jiang, Weizhong; Peng, Min

doi:10.1080/23802359.2021.1907804

Cited by 10 publications

(2 citation statements)

References 9 publications

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“…DNA barcoding is thought to be a method for species discrimination, which helps in comprehending the diversity within an ecosystem and assessing genetic variability between them ( Rajkumar et al ., 2015 ; Abbas et al ., 2017 ; Ghouri et al ., 2020 ). Previous research has used the COI gene to confirm the taxonomic status of many Acanthopagrus species ( Hsu et al ., 2011 ; Wu et al ., 2018 ; Alam et al ., 2020 ; Liu et al ., 2021 ; Pan et al ., 2021 ; Islam et al ., 2022 ; Pombo-Ayora et al ., 2022 ). The host’s morphological identification was established by comparing COI sequences to comparable organisms.…”

Section: Discussionmentioning

confidence: 99%

Morphological and genetic identification of the gill monogenean parasite (Diclidophora merlangi) that infects Twobar Seabream Fish (Acanthopagrus bifasciatus) in the Arabian Gulf, Saudi Arabia

Alojayri,

Al-Quraishy,

Al-Shaebi

et al. 2024

Helminthologia

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Summary Ectoparasites, particularly monogeneans, negatively affect fish health and growth. This study identified monogenean parasites in the twobar seabream, Acanthopagrus bifasciatus (Sparidae), inhabited the Arabian Gulf (Saudi Arabia). Following that, forty A. bifasciatus fish samples were visually examined for monogeneans. Parasite species were collected from the gills and then analyzed morphometrically, morphologically, and molecularly using the partial regions of the large subunit of ribosomal RNA (28S rRNA) and mitochondrial cytochrome C oxidase subunit I (COI) genes. Fish species were also identified using a DNA barcoding approach based on the COI gene. The monogenean species of Diclidophora merlangi (Diclidophoridae) were found in 45% of the fish species studied. The generic features of the Diclidophora genus distinguish this species. This species discriminated itself from congeners by having a muscular bulb with 17 grooved and recurved hooks, 218±10 (184–267) post-ovarian testes, and four pairs of pedunculated clamps of relative sizes. Partial 28S rRNA sequencing from monogeneans revealed that they grouped with members of the genus Diclidophora, forming a monophyletic group that supported the morphological descriptions. Molecular identification revealed that D. merlangi has a unique barcode made up of a COI sequence. The host identity was established as A. bifasciatus based on the COI gene sequences. Furthermore, a molecular phylogenetic study was performed to determine the phylogenetic affinity of parasite species and fish hosts. This study on Diclidophora species is considered the first record of this genus in the examined area.

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Section: Discussionmentioning

confidence: 99%

Morphological and genetic identification of the gill monogenean parasite (Diclidophora merlangi) that infects Twobar Seabream Fish (Acanthopagrus bifasciatus) in the Arabian Gulf, Saudi Arabia

Alojayri,

Al-Quraishy,

Al-Shaebi

et al. 2024

Helminthologia

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“…Due to its high similarity in appearance to L. vitta, L. ophuysenii had been synonymized under the latter by many researchers (Lee and Cheng 1996). Mitochondrial DNA (mtDNA) is an important model system for molecular evolution and phylogenetic study, and the complete mitochondrial genome is viewed as an excellent molecular marker for phylogenetic relationship study (Pan et al 2021). In this study, the complete genome information of L. ophuysenii was provided for an in-depth study of its phylogeny and evolution.…”

Section: Lutjanus Ophuysenii; Mitochondrial Genome; Phylogenetic Analysis; Lutjanidaementioning

confidence: 99%

The complete mitochondrial genome of Lutjanus ophuysenii and phylogenetic analysis

Sun

Jiang

Yuan

et al. 2021

Mitochondrial DNA Part B

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The complete mitochondrial genome of Lutjanus ophuysenii was analyzed by the next-generation sequencing. It was composed of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), 2 ribosomal RNA genes (rRNA), and a control region with a total length of 16,498 bp. This mitochondrial genome has a base composition of 27.78% A, 16.55% G, 30.68% C, and 24.98% T. The phylogenetic analysis revealed that the L. ophuysenii has the closest relationship with L. votta. This mitochondrial genome provides important information for the phylogenetic relationship and genetic resource in this species.

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Isolation and characterization of 112 SNP markers in Yellowfin seabream (Acanthopagrus latus) using RAD sequencing

Zhu

et al. 2022

Conservation Genet Resour

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The complete mitochondrial genome of yellowfin seabream, Acanthopagrus latus (Percoiformes, Sparidae) from Beibu Bay

Cited by 10 publications

References 9 publications

Morphological and genetic identification of the gill monogenean parasite (Diclidophora merlangi) that infects Twobar Seabream Fish (Acanthopagrus bifasciatus) in the Arabian Gulf, Saudi Arabia

Morphological and genetic identification of the gill monogenean parasite (Diclidophora merlangi) that infects Twobar Seabream Fish (Acanthopagrus bifasciatus) in the Arabian Gulf, Saudi Arabia

The complete mitochondrial genome of Lutjanus ophuysenii and phylogenetic analysis

Isolation and characterization of 112 SNP markers in Yellowfin seabream (Acanthopagrus latus) using RAD sequencing

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