A novel inhibitor of cysteine proteinases has been isolated from fruit bodies of a mushroom Clitocybe nebularis. The inhibitor was purified to homogeneity by affinity chromatography and gel filtration, followed by reverse-phase high pressure liquid chromatography. The active inhibitor has an apparent molecular mass of about 34 kDa by gel filtration and by SDS-polyacrylamide gel electrophoresis without prior boiling of the sample. Boiling in 2.5% SDS or incubation in 6 M guanidine hydrochloride resulted in a single band of 17 kDa, indicating homodimer composition with no intersubunit disulfide bonds. The inhibitor in nondenaturing buffer is resistant to boiling in water, retaining its activity and dimer composition. Cysteine proteinases are involved in a diverse array of functions involving specific processing or more general degradation of proteins in a wide variety of organisms, including viruses, fungi, plants, and animals. Their activity is regulated by limited proteolysis of inactive precursors (1, 2), by pH and redox potential of the surroundings, and tight binding with proteinaceous inhibitors (3).Five structurally different groups of protein cysteine proteinase inhibitors have been reported: cystatins (4), thyroglobulin type-1 domain inhibitors or thyropins (5), soybean trypsin inhibitor-like inhibitors of cysteine proteinases from potato (6), pineapple inhibitors of cysteine proteinases (7,8), and very recently, inhibitors of cysteine proteinases homologous to propeptide regions of cysteine proteinases (9). So far, only the mechanism of interaction of the cystatin superfamily of inhibitors has been elucidated (10, 11), followed recently by that of thyropins (12), but overall there is very little information available on all other cysteine proteinase inhibitors concerning specificity, kinetics, and mode of binding.Since cysteine proteinases in mammals have been implicated also in many pathological events, such as tumor invasion and metastasizing cancer (13), bone resorption (14), periodontitis (15), and rheumatoid arthritis (16), there is a need for new specific, efficient, and accessible inhibitors of the enzymes responsible for diagnosis and treatment of these conditions. Fungi (Mycophyta) have been used for religious, medical, and other purposes since ancient times. To our knowledge, no protein cysteine proteinase inhibitors have been characterized in higher fungi (Basydiomyceta), popularly called mushrooms. We report here the identification, some properties, and cloning of a new proteinaceous cysteine proteinase inhibitor from Clitocybe nebularis fruit bodies, which we have called clitocypin, a member of what is very likely a new structural superfamily of cysteine proteinase inhibitors.
EXPERIMENTAL PROCEDURESFungal Material-Edible mushrooms, C. nebularis, were collected in their natural habitat in a forest in November and frozen at Ϫ20 or Ϫ70°C until use. A specimen is deposited at the Department of Pharmaceutical Biology, Faculty of Pharmacy, Ljubljana.Chemicals and Enzymes-Iodoacetate and benzoyl-A...