The canonical mechanism of microtubule-based movement uses adaptor proteins to link cargos to the molecular motors dynein and kinesin. Recently, an alternative mechanism known as "hitchhiking" was discovered: ribonucleoproteins, peroxisomes, lipid droplets, and endoplasmic reticulum achieve motility by hitching a ride on motile early endosomes, rather than attaching directly to a motor protein. In the filamentous fungus Aspergillus nidulans we identified a molecular linker, PxdA, that associates with early endosomes and is essential for peroxisome hitchhiking. However, the molecular components that interact with PxdA, as well as the regulatory mechanisms that govern hitchhiking, are not understood. Here, we report the identification of two new pxdA alleles, including a point mutation (R2044P). We find that the R2044P mutation disrupts PxdA's ability to associate with early endosomes and consequently reduces peroxisome movement. We also identify the phosphatase DipA as an interaction partner of PxdA. DipA associates with early endosomes in a PxdA-dependent manner, and regulates the movement and distribution of peroxisomes. Finally, we find that PxdA also regulates the distribution of lipid droplets, but not autophagosomes or mitochondria. Our data suggest that PxdA is a central regulator of early endosome-dependent hitchhiking and requires the DipA phosphatase to regulate the movement and distribution of lipid droplets and peroxisomes.