“…A putative NF-1 motif in exogenous JSRV LTR (nucleotides 7220 to 7223), which overlaps the exogenous-specific PCR primer P5, is altered and/or lost in the endogenous LTRs, and two tandemly repeated sequences (positions 7347 to 7365 and 7366 to 7384 in the JSRV sequence [43]) appear to be lost by means of an insertion of 30 nucleotides in the endogenous U3. Differences in the nucleotide sequences in these regions could potentially diminish the LTR function (8,9,11,12,17,22,23,26,31,40) and thus reduce the pathogenicity of enJSRVs compared with the exogenous counterpart, as demonstrated in other retroviral systems.…”