IB kinase (IKK) complex is a key regulator of NF-B pathways. Signal-induced interaction of the IKK␥ (NEMO) subunit with the C-terminal IKK␥/NEMO-binding domain (␥BD) of IKK is an essential interaction for IKK regulation.Underlying regulatory mechanism(s) of this interaction are not known. Phosphorylation of ␥BD has been suggested to play a regulatory role for IKK activation. However, a kinase that phosphorylates ␥BD has not been identified. In this study, we used a C-terminal fragment of IKK as substrate and purified Polo-like kinase 1 (Plk1) from HeLa cell extracts by standard chromatography as a ␥BD kinase. Plk1 phosphorylates serines 733, 740, and 750 in the ␥BD of ⌱⌲⌲ in vitro. Phosphorylating ␥BD with Plk1 decreased its affinity for IKK␥ in pulldown assay. We generated phosphoantibodies against serine 740 and showed that ␥BD is phosphorylated in vivo.
IB kinase complex (IKK)2 regulates signal-induced activation of nuclear factor B (NF-B) family transcription factors (1). IKK phosphorylates inhibitor B (IB) proteins, targeting them for ubiquitin-dependent proteasomal degradation (1-4). Classical IKK complex was identified as containing two kinase subunits, IKK␣ and IKK, and the regulatory IKK␥ (also called NEMO) protein (5-7). Additional IKK-related proteins have been identified, but it does not appear that they are associated with IKK. Native IKK is found in large protein complexes ranging from 600 to 900 kDa (5-7). Yeast reconstitution of human IKK shows that one catalytic kinase subunit and the IKK␥ are sufficient to form large IKK complexes similar in size to the native IKK from HeLa cells (8).Regulation of the IKK complex by upstream signaling involves phosphorylation/de-phosphorylation and ubiquitination/de-ubiquitination of IKK subunits and upstream regulators (9 -17). The kinase domain of IKK␣ and IKK contains the signature domain of mitogen-activated protein kinase kinase (MAPKK) and the corresponding activation T loop sequences (6). The T loop phospho-acceptor sites, serines 176 and 180 in IKK␣ and serines 177 and 181 in IKK, are phosphorylated by kinases such as NIK, DNA-PK, NAK, and LKB (1). The T loop serines can also be autophosphorylated within the IKK complex in an IKK␥-dependent manner in the reconstituted IKK complex in yeast (8).Phosphorylation of the C-terminal region of IKK has been implicated in the regulation of the IKK complex. Delhase et al. (18) showed that the C terminus of IKK is phosphorylated in vivo on several serine residues, and this phosphorylation increases upon cell stimulation by TNF␣. They further showed that expression of an IKK mutant in which 10 serines immediately adjacent to the HLH (not including the serines within and adjacent to the ␥BD) are mutated to alanine in HeLa cells generates IKK complexes with prolonged activation kinetics (18). This suggested that TNF-induced phosphorylation of the C terminus of IKK is important for down-regulation of IKK (18). May et al. (19) showed that mutating a serine residue in the ␥BD (Ser-740) to glutamate reduced ...