Recently, an incremental type sensor based backstepping (SBB) control approach, based on singular perturbation theory and Tikhonov's theorem, has been proposed. This Lyapunov function based method uses measurements of control variables and less model knowledge, and it is not susceptible to the model uncertainty caused by fault scenarios. In this paper, the SBB method has been implemented on a fixed wing aircraft with its focus on handling structural changes caused by damages.