A nanosecond absorption spectrometer has been used to measure the optical spectra of hemoglobin between 3 ns and 100 ms after photolysis of the CO complex. The data from a single experiment comprise a surface, defined by the time-ordered set of 50-100 spectra. Singular value decomposition is used to represent the observed spectra in terms of a minimal set of basis spectra and the time course of their amplitudes. Both CO rebinding and conformational changes are found to be multiphasic. Prior to the quaternary structural change, two relaxations are observed that are assigned to geminate recombination followed by a tertiary structural change. These relaxations are interpreted in terms of a kinetic model that points out their potential role in kinetic cooperativity. The rapid escape of CO from the heme pocket compared with the rate of rebinding observed for both R and T quaternary states shows that the quaternary structure controls the overall dissociation rate by changing the rate at which the Fe-CO bond is broken. A comparable description of the control of the overall association rates must await a more complete experimental description of the kinetics of the quaternary T state.Beginning with the work of Gibson (1), experiments on the photolysis of the CO complex of Hb have played a central role in investigations of the mechanism of cooperative ligand binding (2). Hopfield et al. (3) proposed that the major features of the bimolecular recombination kinetics could be rationalized by a two-state allosteric model in which the R and T quaternary structures are in equilibrium. Subsequent studies have focused on measuring the rate of the quaternary structural transition (4-6). Recent improvements in time resolution have introduced new dimensions to the binding mechanism. Transient absorption spectroscopy using 10-ps laser pulses at room temperature showed no evidence of CO rebinding in <1 ns (7,8). Significant recombination of CO was observed, however, at 50-100 ns in experiments using 10-to 30-ns laser pulses (9-13). This has been interpreted as the rebinding of photodissociated CO that has not yet escaped from the protein into the solvent and is called "geminate" recombination (9-13). At later times, both optical absorption and resonance Raman spectra of the deoxy hemes showed spectral changes in 0.5-5 ,us, which have been interpreted as resulting from tertiary conformational changes of the globin (14,15).No kinetic model has been formulated that relates geminate rebinding to heme stereochemical and globin conformational changes or to the overall thermal ligand dissociation and binding reactions. A major objective of the present study is to make this connection. Our approach has been to measure precise optical absorption spectra over a wide range of time (from ""3 ns to 100 ms) following photolysis of HbCO. The results suggest a kinetic model that gives additional insight into the nature of the elementary processes responsible for cooperativity.
MATERIALS AND METHODSHuman HbO2 A was purified by column chroma...