INTRODUCTION
The alpha-synuclein (SNCA) gene has been implicated in the etiology of Parkinson’s disease (PD) and Dementia with Lewy Bodies (DLB).
METHODS
A computational analysis of SNCA-3’UTR to identify potential microRNA binding-sites, and quantitative real-time-PCR to determine their expression in isogenic iPSC-derived dopaminergic and cholinergic neurons as a model of PD and DLB, respectively. Additionally, deep sequencing analysis of SNCA-3’UTR of autopsy confirmed cases of PD, DLB, and normal followed by genetic association analysis of the identified variants.
RESULTS
We identified four miRNA binding-sites, and observed a neuronal-type specific expression profile for each miRNA in the different isogenic iPSC-derived neurons, i.e. dopaminergic and cholinergic. Furthermore, we found that the short-structural variant rs777296100-polyT was moderately associated with DLB but not with PD.
DISCUSSION
We suggest that the regulation of SNCA expression through miRNAs is neuronal-type specific, and possibly plays a part in the phenotypic heterogeneity of synucleinopathies. Furthermore, genetic variability in the SNCA gene may contribute to synucleinopathies in a pathology-specific manner.