Cyanobacteria assigned to the genus Synechococcus are an important component of oligotrophic marine ecosystems, where their growth may be constrained by IOW availability of fixed nitrogen. Urea appears to be a major nitrogen resource in the sea, but little molecular information exists about its utilization by marine organisms, including Synechococcus. Oligonucleotide primers were used to amplify a conserved fragment of the urease (urea amidohydrolase, EC 3.5.1.5) coding region from cyanobacteria. A 5 7 kbp region of the genome of the unicellular marine cyanobacterium Synechococcus sp. strain WH7805 was then cloned, and genes encoding three urease structural subunits and four urease accessory proteins were sequenced and identified by homology. The WH7805 urease had a predicted subunit composition typical of bacterial ureases, but the organization of the WH7805 urease genes was unique. Biochemical characteristics of the WH7805 urease enzyme were consistent with the predictions of the sequence data. Physiological data and sequence analysis both suggested that the urease operon may be nitrogenregulated by the ntcA system in WH7805. Inactivation of the large subunit of urease, ureC, prevented WH7805 and Synechococcus WH8102 from growing on urea, demonstrating that the urease genes cloned are essential to the ability of these cyanobacteria to utilize urea as a nitrogen source.Keywords : nitrogen assimilation, cyanobacterium, ammonium, nitrate, phytoplankton
INTRODUCTIONThe unicellular cyanobacteria assigned to the genus Synechococcus (Waterbury & Rippka, 1989) are an important component of the phytoplankton in many marine and freshwater planktonic ecosystems (Fogg, 1987;Waterbury et al., 1986). They contribute most significantly to total primary production in their most oligotrophic habitats (Chisholm, 1992;Fogg, 1987 ; . The GenBank accession numbers for the sequences reported in this paper are AF065139 and AF056189. Joint, 1986), such as those large oceanic regions where nitrogen availability is thought to limit primary productivity. The nitrogen utilized by the cyanobacteria and other primary producers in these regions appears to derive largely from the planktonic food-web-driven recycling of nitrogen from biomass into ammonium and urea (Dugdale 8c Goering, 1967;Fogg, 1987;Hayward, 1991 ;Price & Harrison, 1988). Urea, which is generally present in marine waters at levels of 0-1-1 pM (Antia et al., 1991), is formed by bacterial degradation of nucleic and amino acids and excreted by many animals as a waste product (McCarthy, 1980;Walsh, 1997). Urea is also the single dominant component of the diverse group of organic nitrogenous compounds known collectively as dissolved organic nitrogen that is present in the oligotrophic oceans at a total concentration of about 5 pM (Antia et al., 1991). For all phytoplankton that have been examined except the Chlorophytes, urease is the enzyme responsible for decomposing urea (Leftley & Syrett, 1973). Urease (urea amidohydrolase, EC 3.5.1.5) is a nickel-requiring metalloenzyme ...