This study determines the extent of degradation of soils in Khubelu wetland in Lesotho and the impact this may have on its water purification potential. 72 soil samples are collected at different sites and depths around the wetland and characterized for different properties. The values of these properties are then used to determine the chemical degradation index (CDI) of the wetland soils. The soils are non‐saline (electrical conductivity < 0.25 mS cm−1), mostly acidic (4.5 < pH < 5.22) with moderate organic matter content (2.06–3.9%). Soil properties vary with depth and from upstream to downstream of the wetland. Values for soil CDI are 3.42, 3.25, and 3.06 for soils from upstream, midstream, and downstream of the wetland respectively, indicating a decrease in soil degradation from upstream to downstream. The dominance of emergent vegetation in the wetland indicates a potential to get rid of sediments in wetland influents but the soil characteristics may present a challenge in the removal of nutrients and organic and inorganic pollutants from these influents. The characteristics of the soils and the extent of soil degradation present some challenges in the wetland’s ability to filter out nutrients and organic and inorganic pollutants.