Infrared laser stimulation of the cochlea has been proposed as a possible alternative to conventional auditory prostheses. The safety margin of laser stimulation must be determined for the practical application of the laser to a prosthesis. This study assessed the effect of laser-induced damage to the cochlea on auditory perception. To examine the effects of laser-induced injury of the auditory system on the perception of auditory stimuli, we trained Mongolian gerbils (Meriones unguiculatus) using a head-fixed classical conditioning task. White noise of 80 dB sound pressure level (SPL) was presented as a conditioned stimulus for a reward (a drop of water), and licking behavior was recorded as a conditioned response. After training, an optic fiber was inserted into the ear canal. Each subject was exposed to continuous pulsed laser exposure of 1.6, 3.3, 6.6, 26.4, 52.8, or 105.6 W/cm2 for 15 h. White noise of various intensities was presented without pairing it with water before and after laser exposure, to assess the decrease in auditory perception due to laser-induced injury. The licking rate did not change after laser exposure of 6.6 W/cm2 or weaker but drastically decreased after 26.4 W/cm2 or higher. These results suggest that the injury threshold in Mongolian gerbils for laser stimulation is between 6.6 and 26.4 W/cm2; laser exposure over 6.6 W/cm2 could be out of the safety margin. These findings will contribute to the appropriate delimitation of safe and effective laser stimulation parameters in future research.