Resonance Raman (rRaman) spectroscopy has been used extensively in
the studies of the heme chemistry of
carbon monoxy adducts. In porphyrin systems, the axial ligand
vibrational modes of the CO, ν(Fe−CO) and
ν(CO), are enhanced with Soret excitation via an A-term
(Franck−Condon) mechanism, but are not expected
with Q excitation (B-term or vibronic mechanism). For the first
time, these modes have been obtained with
Q
y
as well as Soret excitation in rRaman spectra
of CO complexes of ferrous chlorins. The enhancement
with Q
y
excitation arises from an A-term
mechanism of Raman scattering for these chlorins owing to
their
reduced molecular symmetry. Thus, in iron chlorins or other heme
systems with reduced molecular symmetry,
axial ligand vibrational modes may be enhanced with
Q
y
excitation if they are observed with Soret
excitation
in the corresponding iron porphyrins. These findings show rRaman
spectroscopy to be exceptionally valuable
in the study of chlorin chromophores with Q
y
enhancement using red or orange-red excitation.
Furthermore,
the method appears to be selective for chlorin cofactors in proteins
containing multiple heme centers such as
cytochrome bd oxidase (see, for example, Sun; et al.
Biochemistry
1995, 35, 2403−2412).
It has been known
that ν(Fe−CO) and ν(CO) frequencies of CO complexes of
iron porphyrins and heme proteins exhibit linear
correlations, falling into distinct sets for complexes possessing the
same fifth ligand (for example, Ray; et al.
J. Am. Chem. Soc.
1994, 116, 162−176). In this work, we have
found that ν(Fe−CO) and ν(CO) of iron-chlorin−CO complexes also respond to the nature of the opposite axial
ligand and follow the same correlations
derived from porphyrin systems. Thus, the reduction of one of the
pyrrole rings of porphyrins has little
effect on ν(Fe−CO) and ν(CO) frequencies, and their
correlation behavior may perhaps be used to ascertain
the identity of the proximal ligand of the chlorin in a protein system
of unknown coordination, as in cytochrome
bd oxidase.
We perform a systematic experimental study to investigate the velocity fluctuations in the two-dimensional granular matter of low and high friction coefficients subjected to cyclic shear of a range of...
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