Despite recent advances spearheaded by molecular approaches and novel technologies, species description and DNA sequence information are significantly lagging for fungi compared to many other groups of organisms. Large scale sequencing of vouchered herbarium material can aid in closing this gap. Here, we describe an effort to obtain broad ITS sequence coverage of the approximately 6000 macrofungal-species-rich herbarium of the Museum of Natural History in Venice, Italy. Our goals were to investigate issues related to large sequencing projects, develop heuristic methods for assessing the overall performance of such a project, and evaluate the prospects of such efforts to reduce the current gap in fungal biodiversity knowledge. The effort generated 1107 sequences submitted to GenBank, including 416 previously unrepresented taxa and 398 sequences exhibiting a best BLAST match to an unidentified environmental sequence. Specimen age and taxon affected sequencing success, and subsequent work on failed specimens showed that an ITS1 mini-barcode greatly increased sequencing success without greatly reducing the discriminating power of the barcode. Similarity comparisons and nonmetric multidimensional scaling ordinations based on pairwise distance matrices proved to be useful heuristic tools for validating the overall accuracy of specimen identifications, flagging potential misidentifications, and identifying taxa in need of additional species-level revision. Comparison of within- and among-species nucleotide variation showed a strong increase in species discriminating power at 1–2% dissimilarity, and identified potential barcoding issues (same sequence for different species and vice-versa). All sequences are linked to a vouchered specimen, and results from this study have already prompted revisions of species-sequence assignments in several taxa.

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Context Fire is an important driver of species distributions globally. At the same time, biota also influence fire regimes. Animal activities that modify fuel characteristics may influence fire regimes and hence ecosystem function. However, apart from herbivory, animal effects on fuels and fire behaviour have rarely been studied. Aims We examined the effect of nest building by malleefowl (Leipoa ocellata) on litter fuel loads and fire behaviour in the fire-prone, semiarid mallee ecosystem of south-eastern Australia. Malleefowl nests consist of mounds constructed by raking large amounts of leaf litter from the surrounding area. Mound-building activity is likely to affect fuel loads and potentially affect fire behaviour in this environment. Methods Litter cover and mass were compared between paired mound and non-mound sites. Fire behaviour modelling was used to determine whether differences in fuel load were likely to translate into differences in fire behaviour. Additionally, in an area recently burnt by wildfire, the minimum diameter of burnt stems was compared between mound and non-mound sites to determine the effects of malleefowl activity on fire intensity. Key results Malleefowl nesting activity reduced litter fuel loads around mounds. Fire behaviour modelling and post-fire minimum stem diameter measurements showed this led to reduced fire intensity around mounds, even under extreme fire weather conditions. Conclusions The likelihood and intensity of fire is reduced around active malleefowl mounds. Malleefowl nesting contributes to more heterogeneous burn patterns in mallee vegetation. This in turn may contribute to the formation of fire refuges. Implications Few studies have examined the effects of animal activities on fire. This study demonstrates that non-trophic interactions of fauna with fuels may influence fire regimes. Species that reduce or disrupt the continuity or connectivity of fuels could have similar effects to malleefowl in fire-prone regions. Further examination of the interactions of animals and fire regimes will contribute to a better understanding and conservation management of fire-prone ecosystems.

Globally, species extinctions are driven by multiple interacting factors including altered fire regimes and introduced predators. In flammable ecosystems, there is great potential to use fire for animal conservation, however most fire‐based conservation strategies do not explicitly consider interacting factors. In this study, we sought to understand the interrelationships between the endangered heath mouse Pseudomys shortridgei, fire, resource availability and the introduced fox Vulpes vulpes in southeast Australia. We predicted that heath‐mouse relative abundance would respond indirectly to post‐fire age class (recently burnt; 0–3 years since fire, early; 4–9 years, mid; 10–33 years and late; 34–79 years) via the mediating effects of resources (shrub cover and plant‐group diversity) and fox relative abundance. We used structural equation modelling to determine the strength of hypothesized pathways between variables, and mediation analysis to detect indirect effects. Both the cover of shrubs (0–50 cm from the ground) and fox relative abundance were associated with post‐fire age class. Shrub cover was highest 0–9 years after fire, while fox relative abundance was highest in recently burnt vegetation (0–3 years after fire). Heath mice were positively correlated with shrub cover and plant‐group diversity, and negatively correlated with fox relative abundance. We did not detect a direct relationship between heath mice and post‐fire age class, but they were indirectly associated with age class via its influence on both shrub cover and fox relative abundance. Our findings suggest that heath mice will benefit from a fire regime promoting dense shrub regeneration in combination with predator control. Understanding the indirect effects of fire on animals may help to identify complementary management practices that can be applied concurrently to benefit vulnerable species. Analytical and management frameworks that include multiple drivers of species abundance and explicitly recognize the indirect effects of fire regimes will assist animal conservation.

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