Balancing model complexity is a key challenge of modern computational ecology, particularly so since the spread of machine learning algorithms. Species distribution models are often implemented using a wide variety of machine learning algorithms that can be fine‐tuned to achieve the best model prediction while avoiding overfitting. We have released SDMtune , a new R package that aims to facilitate training, tuning, and evaluation of species distribution models in a unified framework. The main innovations of this package are its functions to perform data‐driven variable selection, and a novel genetic algorithm to tune model hyperparameters. Real‐time and interactive charts are displayed during the execution of several functions to help users understand the effect of removing a variable or varying model hyperparameters on model performance. SDMtune supports three different metrics to evaluate model performance: the area under the receiver operating characteristic curve, the true skill statistic, and Akaike's information criterion corrected for small sample sizes. It implements four statistical methods: artificial neural networks, boosted regression trees, maximum entropy modeling, and random forest. Moreover, it includes functions to display the outputs and create a final report. SDMtune therefore represents a new, unified and user‐friendly framework for the still‐growing field of species distribution modeling.
High-alpine ecosystems are strongly seasonal and adverse environments. In these ecosystems, the brevity of optimal breeding conditions means species must efficiently track spatiotemporal variations in resources in order to synchronise their reproductive effort with peaks in food availability. Understanding the details of prey-habitat associations and their seasonality in such ecosystems is thus key for deciphering species' ecological niches and developing sound conservation action. However, the ecological requirements of high-alpine avifauna remain poorly documented. Furthermore, mountain ranges in the Old World are affected not only by profound alterations of climate, but also by changes in land-use, the interaction of which hampers both proper forecasting of species' resilience to environmental change and delivery of evidence-based conservation guidance. Here, we investigate the prey-habitat associations of a high-alpine passerine, the White-winged Snowfinch (Montifringilla nivalis), by radio-tracking breeding adults in the Swiss Alps. In late spring and early summer, Snowfinches foraged preferentially next to invertebrate-rich, melting snow patches where Tipulidae larvae abound. Later, in mid-summer, they favoured flower-rich alpine meadows. When foraging, they always preferred short ground vegetation while avoiding rock and scree. Their pattern of foraging habitat selection reflects trade-offs between food abundance and accessibility, i.e. prey availability. The reliance of this passerine on a habitat mosaic where snow plays a major role questions its ability to cope with climate change due to future habitat loss and potential phenological mismatches. Targeted grazing could possibly help in habitat management by aiming at maintaining invertebraterich meadows with short vegetation. Yet, it remains an open question whether habitat management would suffice to compensate for the potentially detrimental effects of the progressive retreat of snow fields to higher elevations.
Species inhabiting mountain ecosystems are expected to be particularly vulnerable to environmental change, yet information on their basic ecology is often lacking. Knowledge from field‐based empirical studies remains essential to refine our understanding of the impact of current habitat alterations and for the consequential development of meaningful conservation management strategies. This study focuses on a poorly investigated and vulnerable mountain bird species in Europe, the Ring Ouzel Turdus torquatus. Our aim was to identify the species’ key ecological requirements during the crucial period of nestling provisioning in the context of environmental change. We radiotracked and observed Alpine Ring Ouzels in a high‐density population, investigating their pattern of foraging habitat selection in 2015 and 2017, and evaluated the transferability of these results over a wider geographical range across the SW Swiss Alps. Foraging birds selected, consistently in space and time, short grass swards (< 10 cm) with interspersed patches of accessible and penetrable soils, at intermediate moisture levels (around 40–65% volumetric water content). In Alpine ecosystems, this microhabitat configuration is typically widespread during the spring snowmelt, but extremely seasonal, with a rapid decrease in its availability over the course of the breeding season. This underlines the high vulnerability of the Ring Ouzel to environmental change: an earlier snowmelt could generate a temporal mismatch between the peak of the breeding effort and optimal foraging conditions; however, abandoning grazing activities on semi‐wooded Alpine pastures may further decrease foraging habitat suitability through taller and denser grass swards, and subsequent woody vegetation encroachment. This study provides a mechanistic appraisal of the challenges Ring Ouzels will face in the future, as well as initial guidelines for targeted habitat management within timberline ecotones.
Mountain ecosystems naturally experience strong seasonal weather variations leading to a brief peak in food availability that constrains bird reproduction. Climate change accentuates both the intra‐ and interannual weather variability, which in turn can reduce the predictability of food resources and hence impact population demography. Yet, relatively little is known about the influence of environmental factors on the breeding ecology of mountain birds. Here, we quantified the nestling diet and provisioning behaviour of the Alpine ring ouzel Turdus torquatus alpestris, an emblematic and declining thrush species typical of central European treeline ecotones, and relate these parameters to local weather conditions. Nests were monitored with camcorders to assess prey provisioning frequency and identify items delivered by parents to nestlings, as well as to estimate prey biomass. Our results indicate the prominence of earthworms (Lumbricidae) in the nestling diet, both in terms of abundance (80%) and biomass (90%). Elevated ambient temperatures negatively impacted both prey provisioning rates and biomass delivered to chicks by parents, while rainfall had a positive effect on the delivered biomass. The mean prey item biomass decreased throughout the breeding season, as did the proportion of earthworms in nestlings' diet. These findings highlight the key role played by local weather in parental provisioning behaviour, probably reflecting the low availability of the staple food source, earthworms, in warm and dry weather contexts. In particular, they underpin how climate alterations, notably increasing ambient temperatures and changing precipitation regimes, could impact mountain birds. Although effects on reproductive performance and population dynamics still ought to be studied, these results further our understanding of the ecological mechanisms potentially at play in the decline of wildlife inhabiting high‐elevation, climate‐sensitive ecosystems.
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