Controlled navigation in the phase diagram of protein crystallization and probing by advanced Dynamic Light Scattering (DLS) technology provided new information and more insights about the early processes during the nucleation process. The observed hydrodynamic radius distribution pattern clearly reveals a two-step mechanism of nucleation and the occurrence of liquid dense protein clusters, which were verified by transmission electron microscopy. The growth kinetics of these protein clusters, forming distinct radii fractions, is analyzed in real-time. Further, the data confirmed that critical nuclei show a distinct different radius distribution than the liquid dense clusters. The data and results provide experimental evidence that during nucleation, a formation of distinct liquid clusters with high protein concentration occur prior to a transition to crystal nuclei by increasing the internal structural order of these clusters, subsequently.
A combined imaging and dynamic light scattering (DLS) system has been developed for routine measurements in droplets in the multiwell plates used in protein crystallization. The system was tested with several standard proteins and found to be of high value for rapid identification of good crystallization conditions. A relationship between the rate of protein-aggregate-size increase and the probability of crystal formation was observed. DLS is a suitable tool for a fast optimization of the protein crystallization process.
Crystallization of biological macromolecules such as proteins implies several prerequisites, for example, the presence of one or more initial nuclei, sufficient amounts of the crystallizing substance and the chemical potential to provide the free energy needed to force the process. The initiation of a crystallization process itself is a stochastic event, forming symmetrically assembled nuclei over kinetically preferred protein‐dense liquid clusters. The presence of a spatial repetitive orientation of macromolecules in the early stages of the crystallization process has so far proved undetectable. However, early identification of the occurrences of unit cells is the key to nanocrystal detection. The optical properties of a crystal lattice offer a potential signal with which to detect whether a transition from disordered to ordered particles occurs, one that has so far not been tested in nanocrystalline applications. The ability of a lattice to depolarize laser light depends on the different refractive indices along different crystal axes. In this study a unique experimental setup is used to detect nanocrystal formation by application of depolarized scattered light. The results demonstrate the successful detection of nano‐sized protein crystals at early stages of crystal growth, allowing an effective differentiation between protein‐dense liquid cluster formation and ordered nanocrystals. The results are further verified by complementary methods like X‐ray powder diffraction, second harmonic generation, ultraviolet two‐photon excited fluorescence and scanning electron microscopy.
Integral membrane proteins are among the most fascinating and important biomolecules as they play a vital role in many biological functions. Knowledge of their atomic structures is fundamental to the understanding of their biochemical function and key in many drug discovery programs. However, over the years, structure determination of integral membrane proteins has proven to be far from trivial, hence they are underrepresented in the protein data bank. Low expression levels, insolubility and instability are just a few of the many hurdles one faces when studying these proteins. X-ray crystallography has been the most used method to determine atomic structures of membrane proteins. However, the production of high quality membrane protein crystals is always very challenging, often seen more as art than a rational experiment. Here we review valuable approaches, methods and techniques to successful membrane protein crystallisation.
A novel experimental setup is described which allows one to obtain detailed information on structural and dynamical changes in polymers during crystallization. This technique includes simultaneous measurements of small angle-wide angle x-ray scattering and dielectric spectroscopy (SWD). The capabilities of the technique have been probed by following in real time the crystallization process of a model crystallizable polymer: poly(ethylene terephthalate). By performing these experiments, simultaneous information from both, the amorphous and the crystalline phase is obtained providing a complete description of changes occurring during a crystallization process. The SWD technique opens up new promising perspectives for the experimental study of the relation between structure and dynamics in materials science.
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