Twelve meta-QTL for seed Fe and Zn concentration and/or content were identified from 87 QTL originating from seven population grown in sixteen field trials. These meta-QTL include 2 specific to iron, 2 specific to zinc and 8 that co-localize for iron and zinc concentrations and/or content. Common bean (Phaseolus vulgaris L.) is the most important legume for human consumption worldwide and it is an important source of microelements, especially iron and zinc. Bean biofortification breeding programs develop new varieties with high levels of Fe and Zn targeted for countries with human micronutrient deficiencies. Biofortification efforts thus far have relied on phenotypic selection of raw seed mineral concentrations in advanced generations. While numerous quantitative trait loci (QTL) studies have been conducted to identify genomic regions associated with increased Fe and Zn concentration in seeds, these results have yet to be employed for marker-assisted breeding. The objective of this study was to conduct a meta-analysis from seven QTL studies in Andean and Middle American intra- and inter-gene pool populations to identify the regions in the genome that control the Fe and Zn levels in seeds. Two meta-QTL specific to Fe and two meta-QTL specific to Zn were identified. Additionally, eight Meta QTL that co-localized for Fe and Zn concentration and/or content were identified across seven chromosomes. The Fe and Zn shared meta-QTL could be useful candidates for marker-assisted breeding to simultaneously increase seed Fe and Zn. The physical positions for 12 individual meta-QTL were identified and within five of the meta-QTL, candidate genes were identified from six gene families that have been associated with transport of iron and zinc in plants.
Abstract. The remarkable progress in cosmic microwave background (CMB) studies over past decade has led to the era of precision cosmology in striking agreement with the ΛCDM model. However, the lack of power in the CMB temperature anisotropies at large angular scales (low-ℓ), as has been confirmed by the recent Planck data also (up to ℓ = 40), although statistically not very strong (less than 3σ), is still an open problem. One can avoid to seek an explanation for this problem by attributing the lack of power to cosmic variance or can look for explanations i.e., different inflationary potentials or initial conditions for inflation to begin with, non-trivial topology, ISW effect etc. Features in the primordial power spectrum (PPS) motivated by the early universe physics has been the most common solution to address this problem. In the present work we also follow this approach and consider a set of PPS which have features and constrain the parameters of those using WMAP 9 year and Planck data employing Markov-Chain Monte Carlo (MCMC) analysis. The prominent feature of all the models of PPS that we consider is an infra-red cut off which leads to suppression of power at large angular scales. We consider models of PPS with maximum three extra parameters and use Akaike information criterion (AIC) and Bayesian information criterion (BIC) of model selection to compare the models. For most models, we find good constraints for the cut off scale k c , however, for other parameters our constraints are not that good. We find that sharp cut off model gives best likelihood value for the WMAP 9 year data, but is as good as power law model according to AIC. For the joint WMAP 9 + Planck data set, Starobinsky model is slightly preferred by AIC which is also able to produce CMB power suppression up to ℓ ≤ 30 to some extent. However, using BIC criteria, one finds model(s) with least number of parameters (power law model) are always preferred.
Large-scale data from digital infrastructure, like mobile phone networks, provides rich information on the behavior of millions of people in areas affected by climate stress. Using anonymized data on mobility and calling behavior from 5.1 million Grameenphone users in Barisal Division and Chittagong District, Bangladesh, we investigate the effect of Cyclone Mahasen, which struck Barisal and Chittagong in May 2013. We characterize spatiotemporal patterns and anomalies in calling frequency, mobile recharges, and population movements before, during and after the cyclone. While it was originally anticipated that the analysis might Climatic Change (2016) WorldPop, Department of Geography and Environment, University of Southampton, Southampton, UK detect mass evacuations and displacement from coastal areas in the weeks following the storm, no evidence was found to suggest any permanent changes in population distributions. We detect anomalous patterns of mobility both around the time of early warning messages and the storm's landfall, showing where and when mobility occurred as well as its characteristics. We find that anomalous patterns of mobility and calling frequency correlate with rainfall intensity (r = .75, p < 0.05) and use calling frequency to construct a spatiotemporal distribution of cyclone impact as the storm moves across the affected region. Likewise, from mobile recharge purchases we show the spatiotemporal patterns in people's preparation for the storm in vulnerable areas. In addition to demonstrating how anomaly detection can be useful for modeling human adaptation to climate extremes, we also identify several promising avenues for future improvement of disaster planning and response activities.
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