Computed Tomography (CT) is a widely use medical image modality in clinical medicine, because it produces excellent visualizations of fine structural details of the human body. In clinical procedures, it is desirable to acquire CT scans by minimizing the X-ray flux to prevent patients from being exposed to high radiation. However, these Low-Dose CT (LDCT) scanning protocols compromise the signal-to-noise ratio of the CT images because of noise and artifacts over the image space. Thus, various restoration methods have been published over the past 3 decades to produce high-quality CT images from these LDCT images. More recently, as opposed to conventional LDCT restoration methods, Deep Learning (DL)-based LDCT restoration approaches have been rather common due to their characteristics of being data-driven, high-performance, and fast execution. Thus, this study aims to elaborate on the role of DL techniques in LDCT restoration and critically review the applications of DL-based approaches for LDCT restoration. To achieve this aim, different aspects of DL-based LDCT restoration applications were analyzed. These include DL architectures, performance gains, functional requirements, and the diversity of objective functions. The outcome of the study highlights the existing limitations and future directions for DL-based LDCT restoration. To the best of our knowledge, there have been no previous reviews, which specifically address this topic.
The rapid growth in biomedical datasets has generated high dimensionality features that negatively impact machine learning classifiers. In machine learning, feature selection (FS) is an essential process for selecting the most significant features and reducing redundant and irrelevant features. In this study, an equilibrium optimization algorithm (EOA) is used to minimize the selected features from high-dimensional medical datasets. EOA is a novel metaheuristic physics-based algorithm and newly proposed to deal with unimodal, multi-modal, and engineering problems. EOA is considered as one of the most powerful, fast, and best performing population-based optimization algorithms. However, EOA suffers from local optima and population diversity when dealing with high dimensionality features, such as in biomedical datasets. In order to overcome these limitations and adapt EOA to solve feature selection problems, a novel metaheuristic optimizer, the so-called improved equilibrium optimization algorithm (IEOA), is proposed. Two main improvements are included in the IEOA: The first improvement is applying elite opposite-based learning (EOBL) to improve population diversity. The second improvement is integrating three novel local search strategies to prevent it from becoming stuck in local optima. The local search strategies applied to enhance local search capabilities depend on three approaches: mutation search, mutation–neighborhood search, and a backup strategy. The IEOA has enhanced the population diversity, classification accuracy, and selected features, and increased the convergence speed rate. To evaluate the performance of IEOA, we conducted experiments on 21 biomedical benchmark datasets gathered from the UCI repository. Four standard metrics were used to test and evaluate IEOA’s performance: the number of selected features, classification accuracy, fitness value, and p-value statistical test. Moreover, the proposed IEOA was compared with the original EOA and other well-known optimization algorithms. Based on the experimental results, IEOA confirmed its better performance in comparison to the original EOA and the other optimization algorithms, for the majority of the used datasets.
Colorectal cancer (CRC) is the third most deadly cancer worldwide. The use of gut microbiome in early detection of the disease has attracted much attention from the research community, mainly because of its noninvasive nature. Recent achievements in next generation sequencing technology have led to increased availability of sequence data and enabled an environment for the growth of gut microbiome research. The use of conventional machine learning algorithms for automatic detection of CRC based on the microbiome is limited by factors such as low accuracy and the need for manual selection of features. Despite their success in other fields, Deep Neural Network (DNN) algorithms have limitations in microbiome-based CRC classification. These limitations include high dimensionality of microbiome data and other characteristics associated with sequence data such as feature dominance. In this paper, we propose a feature augmentation approach that aggregates data normalization methods to extend existing features of a dataset. The proposed method combines feature extension with data augmentation to improve CRC classification performance of a DNN model. The proposed model obtained area under the curve (AUC) scores of 0.96 and 0.89 on two publicly available microbiome datasets.
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