A generalized concept of philicity is introduced through a resolution of identity, encompassing electrophilic, nucleophilic, and radial reactions. Locally, a particular molecular site may be more prone to electrophilic attack or another may be more prone to nucleophilic attack, but the overall philicity of the whole molecule remains conserved. Local philicity is by far the most powerful concept of reactivity and selectivity when compared to the global electrophilicity index, Fukui function, local softness, or global softness because it contains information about almost all of the known global and local descriptors of chemical reactivity and selectivity.

Background: DNA apurinic/apyrimidinic (AP) sites are toxic and mutagenic if unrepaired by AP endonucleases. Results: Structural, mutational, and computational analyses of prototypic AP endonucleases APE1 and Nfo identify surprising similarities. Conclusion: APE1 and Nfo reveal functional equivalences illuminating their catalytic reaction. Significance: A conserved catalytic geometry is specific to AP site removal despite different enzyme structures and metal ions.

This paper presents a combined experimental and theoretical study of the dynamics of O((3)P) + D(2) collisions, with emphasis on a center-of-mass (c.m.) collision energy of 25 kcal mol(-1). The experiments were conducted with a crossed-molecular-beams apparatus, employing a laser detonation source to produce hyperthermal atomic oxygen and mass spectrometric detection to measure the product angular and time-of-flight distributions. The novel beam source, which enabled these experiments to be conducted, contributed unique challenges to the experiments and to the analysis, so the experimental methods and approach to the analysis are discussed in detail. Three different levels of theory were used: (1) quasiclassical trajectories (QCT), (2) time-independent quantum scattering calculations based on high-quality potential surfaces for the two lower-energy triplet states, and (3) trajectory-surface-hopping (TSH) studies that couple the triplet surfaces with the lowest singlet surface using a spin-orbit Hamiltonian derived from ab-initio calculations. The latter calculations explore the importance of intersystem crossing in the dynamics. Both experiment and theory show that inelastically scattered O atoms scatter almost exclusively in the forward direction, with little or no loss of translational energy. For the reaction, O((3)P) + D(2) --> OD + D, the experiment shows that, on average, approximately 50% of the available energy goes into product translation and that the OD product angular distributions are largely backward-peaked. These results may be interpreted in light of the QCT and TSH calculations, leading to the conclusion that the reaction occurs mainly on triplet potential energy surfaces with, at most, minor intersystem crossing to a singlet surface. Reaction on either of the two low-lying reactive triplet surfaces proceeds through a rebound mechanism in which the angular distributions are backward-peaked and the product OD is both vibrationally and rotationally excited. The quantum scattering results are in good agreement with QCT calculations, indicating that quantum effects are relatively small for this reaction at a collision energy of 25 kcal mol(-1).

We present the first measurements of the relative excitation function for the O(3P)+H2 reaction, performed with the use of a crossed molecular beams apparatus in conjunction with a high-energy (laser detonation) source of O atoms. The results are in excellent agreement with accurate quantum wave packet calculations.

Time evolution of various reactivity parameters such as electronegativity, hardness, and polarizability associated with a collision process between a proton and an X- atom/ion (X = He, Li(+), Be(2+), B(3+), C(4+)) in its ground ((1)S) and excited((1)P,(1)D,(1)F) electronic states as well as various complexions of a two-state ensemble is studied using time-dependent and excited-state density functional theory. This collision process may be considered to be a model mimicking the actual chemical reaction between an X-atom/ion and a proton to give rise to an XH(+) molecule. A favorable dynamical process is characterized by maximum hardness and minimum polarizability values according to the dynamical variants of the principles of maximum hardness and minimum polarizability. An electronic excitation or an increase in the excited-state contribution in a two-state ensemble makes the system softer and more polarizable, and the proton, being a hard acid, gradually prefers less to interact with X as has been discerned through the drop in maximum hardness value and the increase in the minimum polarizability value when the actual chemical process occurs. Among the noble gas elements, Xe is the most reactive. During the reaction: H(2) + H(+) --> H(3)(+) hardness maximizes and polarizability minimizes and H(2) is more reactive in its excited state. Regioselectivity of proton attack in the O-site of CO is clearly delineated wherein HOC(+) may eventually rearrange itself to go to the thermodynamically more stable HCO(+).