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Aims:  To gain an understanding of the environmental factors that affect the growth of the bacterium Sporosarcina pasteurii, the metabolism of the bacterium and the calcium carbonate precipitation induced by this bacterium to optimally implement the biological treatment process, microbial induced calcium carbonate precipitation (MICP), in situ. Methods and Results:  Soil column and batch tests were used to assess the effect of likely subsurface environmental factors on the MICP treatment process. Microbial growth and mineral precipitation were evaluated in freshwater and seawater. Environmental conditions that may influence the ureolytic activity of the bacteria, such as ammonium concentration and oxygen availability, as well as the ureolytic activities of viable and lysed cells were assessed. Treatment formulation and injection rate, as well as soil particle characteristics are other factors that were evaluated for impact on uniform induction of cementation within the soils. Conclusions:  The results of the study presented herein indicate that the biological treatment process is equally robust over a wide range of soil types, concentrations of ammonium chloride and salinities ranging from distilled water to full seawater; on the time scale of an hour, it is not diminished by the absence of oxygen or lysis of cells containing the urease enzyme. Significance and Impact of Study:  This study advances the biological treatment process MICP towards field implementation by addressing key environmental hurdles faced with during the upscaling process.

Carbon sequestration, infrastructure rehabilitation, brownfields clean-up, hazardous waste disposal, water resources protection and global warming—these twenty-first century challenges can neither be solved by the high-energy consumptive practices that hallmark industry today, nor by minor tweaking or optimization of these processes. A more radical, holistic approach is required to develop the sustainable solutions society needs. Most of the above challenges occur within, are supported on, are enabled by or grown from soil. Soil, contrary to conventional civil engineering thought, is a living system host to multiple simultaneous processes. It is proposed herein that ‘soil engineering in vivo ’, wherein the natural capacity of soil as a living ecosystem is used to provide multiple solutions simultaneously, may provide new, innovative, sustainable solutions to some of these great challenges of the twenty-first century. This requires a multi-disciplinary perspective that embraces the science of biology, chemistry and physics and applies this knowledge to provide multi-functional civil and environmental engineering designs for the soil environment. For example, can native soil bacterial species moderate the carbonate cycle in soils to simultaneously solidify liquefiable soil, immobilize reactive heavy metals and sequester carbon—effectively providing civil engineering functionality while clarifying the ground water and removing carbon from the atmosphere? Exploration of these ideas has begun in earnest in recent years. This paper explores the potential, challenges and opportunities of this new field, and highlights one biogeochemical function of soil that has shown promise and is developing rapidly as a new technology. The example is used to propose a generalized approach in which the potential of this new field can be fully realized.

Microbially induced calcite precipitation (MICP) offers an alternative solution to a wide range of civil engineering problems. Laboratory tests have shown that MICP can immobilize trace metals and radionuclides through co-precipitation with calcium carbonate. MICP has also been shown to improve the undrained shear response of soils and offers potential benefits over current ground improvement techniques that may pose environmental risks and suffer from low "certainty of execution." Our objective is to identify an effective means of achieving uniform distribution of precipitate in a one-dimensional porous medium. Our approach involves column experiments and numerical modeling of MICP in both forward and inverse senses, using a simplified reaction network, with the bacterial strain Sporoscarcina pasteurii. It was found that the stop-flow injection of a urea-and calcium-rich solution produces a more uniform calcite distribution as compared to a continuous injection method, even when both methods involve flow in opposite direction to that used for bacterial cell emplacement. Inverse modeling was conducted by coupling the reactive transport code TOUGHREACT to UCODE for estimating chemical reaction rate parameters with a good match to the experimental data. It was found, however, that the choice of parameters and data was not sufficient to determine a unique solution, and our findings suggest that additional time and space-varying analytical data of aqueous species would improve the accuracy of numerical modeling of MICP.

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