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BackgroundStevia rebaudiana (Asteraceae), native from Paraguay, accumulates steviol glycosides (SGs) into its leaves. These compounds exhibit acaloric intense sweet taste which answers to consumer demands for reducing daily sugar intake. Despite the developpement of S. rebaudiana cultivation all over the world, the development of new cultivars is very recent, in particular due to a colossal lack of (1) germplasm collection and breeding, (2) studies on genetic diversity and its structuring, (3) genomic tools.ResultsIn this study, we developped 18 EST-SSR from 150,258 EST from The Compositae Genome Project of UC Davis (http://compgenomics.ucdavis.edu/data/). We genotyped 145 S. rebaudiana individuals, issued from thirty-one cultivars and thirty-one landraces of various origins worldwide. Markers polymorphic information content (PIC) ranged between 0.60 and 0.84. An average of 12 alleles per locus and a high observed heterozygoty of 0.69 could be observed. The landraces revealed twice as many private alleles as cultivars. The genotypes could be clustered into 3 genetic populations. The landraces were grouped in the same cluster in which the oldest cultivars “Eirete” and “MoritaIII” type are also found. The other two clusters only include cultivated genotypes. One of them revealed an original genetic variability. SG phenotypes could not discriminate the three genetic clusters but phenotyping showed a wide range of composition in terms of bitter to sweet SGs.ConclusionThis is the first study of genetic diversity in Stevia rebaudiana involving 145 genotypes, including known cultivars as well as landrace populations of different origin. This study pointed out the structuration of S. rebaudiana germplasm and the resource of the landrace populations for genetic improvement, even on the trait of SG’s composition.

Stevia rebaudiana, for which cultivation is on the increase worldwide, accumulates acaloric intense sweeteners called steviol glycosides (SGs) in its leaves. Yields can be affected by Septoria leaf spot (SLS) caused by Septoria spp. The objectives of the research were (1) to morphologically and genetically characterize five isolates of Septoria sp. found for the first time from outbreaks of Septoria in stevia fields in Southwestern France and (2) to screen S. rebaudiana germplasm from diverse origins through an automated inoculation method using one of the isolates. Multilocus sequence typing grouped the five isolates obtained from symptomatic plants, closely related to Septoria lycopersici and Septoria apiicola. The response to Septoria sp. of 10 genotypes from different origins was assessed for disease severity (DS), either by visually scoring the symptomatic portion of the whole plants or the portion of symptomatic foliar area (PLSA) determined by image analysis, and the area under the disease progress curve (AUDPC) calculated on the basis of the disease severity rating taken 12, 15, 18, and 21 days after inoculation. No genotypes with complete resistance were identified. Moderately susceptible genotypes “Gawi” and “Esplac1” exhibited only 10 to 15% of symptomatic part on whole plant and the slowest disease development. They could be distinguished from highly susceptible ones “E8”, “C”, and “E161718” exhibiting up to 40% of symptomatic part on whole plant. The variability of response to Septoria sp. that exists in S. rebaudiana opens up the field of breeding strategies for the development of new cultivars for sustainable and organic S. rebaudiana production.