To address one of the most challenging issues at the cellular level, this paper surveys the fuzzy methods used in gene regulatory networks (GRNs) inference. GRNs represent causal relationships between genes that have a direct influence, trough protein production, on the life and the development of living organisms and provide a useful contribution to the understanding of the cellular functions as well as the mechanisms of diseases. Fuzzy systems are based on handling imprecise knowledge, such as biological information. They provide viable computational tools for inferring GRNs from gene expression data, thus contributing to the discovery of gene interactions responsible for specific diseases and/or ad hoc correcting therapies. Increasing computational power and high throughput technologies have provided powerful means to manage these challenging digital ecosystems at different levels from cell to society globally. The main aim of this paper is to report, present, and discuss the main contributions of this multidisciplinary field in a coherent and structured framework.

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Mining frequent itemsets is an attractive research activity in data mining whose main aim is to provide useful relationships among data. Consequently, several open-source development platforms are continuously developed to facilitate the users' exploitation of new data mining tasks. Among these platforms, the R language is one of the most popular tools. In this paper, we defend the usefulness of providing a new version of arules package that can mine frequent generator itemsets, we describe the possibility of mining frequent generator itemsets in arules package, and we discuss what generators can be used for a classification task through an application example.